Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCLP35914 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.05■□□□□ 0.48
HMGCLP35914 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCLP35914 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.05■□□□□ 0.48
HMGCLP35914 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.05■□□□□ 0.48
HMGCLP35914 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.05■□□□□ 0.48
HMGCLP35914 NOC2LP1-202ENST00000452600 2235 ntBASIC18.04■□□□□ 0.48
HMGCLP35914 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
HMGCLP35914 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGCLP35914 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
HMGCLP35914 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
HMGCLP35914 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGCLP35914 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.04■□□□□ 0.48
HMGCLP35914 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.04■□□□□ 0.48
HMGCLP35914 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGCLP35914 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.04■□□□□ 0.48
HMGCLP35914 TSPY22P-201ENST00000427496 604 ntBASIC18.04■□□□□ 0.48
HMGCLP35914 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
HMGCLP35914 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.04■□□□□ 0.48
HMGCLP35914 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.04■□□□□ 0.48
HMGCLP35914 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.04■□□□□ 0.48
HMGCLP35914 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
HMGCLP35914 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.04■□□□□ 0.48
HMGCLP35914 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
HMGCLP35914 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HMGCLP35914 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.04■□□□□ 0.48
HMGCLP35914 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGCLP35914 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.04■□□□□ 0.48
HMGCLP35914 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.04■□□□□ 0.48
HMGCLP35914 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGCLP35914 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGCLP35914 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
HMGCLP35914 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.03■□□□□ 0.48
HMGCLP35914 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGCLP35914 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.03■□□□□ 0.48
HMGCLP35914 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
HMGCLP35914 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGCLP35914 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGCLP35914 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.03■□□□□ 0.48
HMGCLP35914 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGCLP35914 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HMGCLP35914 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HMGCLP35914 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HMGCLP35914 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
HMGCLP35914 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGCLP35914 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HMGCLP35914 TSPY12P-201ENST00000421279 868 ntBASIC18.03■□□□□ 0.48
HMGCLP35914 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.03■□□□□ 0.48
HMGCLP35914 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
HMGCLP35914 KRT8P26-201ENST00000534154 1276 ntBASIC18.03■□□□□ 0.48
HMGCLP35914 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGCLP35914 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.03■□□□□ 0.48
HMGCLP35914 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
HMGCLP35914 AP000550.4-202ENST00000639755 178 ntBASIC18.03■□□□□ 0.48
HMGCLP35914 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
HMGCLP35914 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.03■□□□□ 0.48
HMGCLP35914 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
HMGCLP35914 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
HMGCLP35914 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGCLP35914 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGCLP35914 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.03■□□□□ 0.48
HMGCLP35914 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGCLP35914 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGCLP35914 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
HMGCLP35914 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.03■□□□□ 0.48
HMGCLP35914 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGCLP35914 IER3-202ENST00000376377 1350 ntBASIC18.03■□□□□ 0.48
HMGCLP35914 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMGCLP35914 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
HMGCLP35914 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
HMGCLP35914 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
HMGCLP35914 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.02■□□□□ 0.48
HMGCLP35914 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HMGCLP35914 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HMGCLP35914 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HMGCLP35914 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HMGCLP35914 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.02■□□□□ 0.48
HMGCLP35914 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HMGCLP35914 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HMGCLP35914 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
HMGCLP35914 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HMGCLP35914 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HMGCLP35914 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
HMGCLP35914 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HMGCLP35914 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HMGCLP35914 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.02■□□□□ 0.48
HMGCLP35914 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HMGCLP35914 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HMGCLP35914 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.02■□□□□ 0.48
HMGCLP35914 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.02■□□□□ 0.48
HMGCLP35914 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.02■□□□□ 0.48
HMGCLP35914 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.02■□□□□ 0.48
HMGCLP35914 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.02■□□□□ 0.48
HMGCLP35914 LETM1P2-201ENST00000597330 2178 ntBASIC18.02■□□□□ 0.48
HMGCLP35914 AC091076.1-201ENST00000610741 619 ntBASIC18.02■□□□□ 0.48
HMGCLP35914 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HMGCLP35914 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HMGCLP35914 AC007613.1-201ENST00000572811 2597 ntBASIC18.02■□□□□ 0.47
HMGCLP35914 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.02■□□□□ 0.47
HMGCLP35914 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms