Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.37■□□□□ 0.53
PRAMEF11O60813 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF11O60813 AL592071.1-201ENST00000611956 408 ntBASIC18.37■□□□□ 0.53
PRAMEF11O60813 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.37■□□□□ 0.53
PRAMEF11O60813 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
PRAMEF11O60813 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PRAMEF11O60813 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PRAMEF11O60813 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.37■□□□□ 0.53
PRAMEF11O60813 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PRAMEF11O60813 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.37■□□□□ 0.53
PRAMEF11O60813 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF11O60813 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.37■□□□□ 0.53
PRAMEF11O60813 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PRAMEF11O60813 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PRAMEF11O60813 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF11O60813 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF11O60813 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF11O60813 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF11O60813 AP000997.3-201ENST00000623333 2250 ntBASIC18.37■□□□□ 0.53
PRAMEF11O60813 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF11O60813 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF11O60813 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF11O60813 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PRAMEF11O60813 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF11O60813 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF11O60813 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF11O60813 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF11O60813 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF11O60813 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF11O60813 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.36■□□□□ 0.53
PRAMEF11O60813 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF11O60813 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF11O60813 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF11O60813 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF11O60813 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF11O60813 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.36■□□□□ 0.53
PRAMEF11O60813 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
PRAMEF11O60813 UPK3BP1-201ENST00000428678 509 ntBASIC18.36■□□□□ 0.53
PRAMEF11O60813 AP002383.4-201ENST00000442518 975 ntBASIC18.36■□□□□ 0.53
PRAMEF11O60813 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.36■□□□□ 0.53
PRAMEF11O60813 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF11O60813 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.36■□□□□ 0.53
PRAMEF11O60813 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF11O60813 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF11O60813 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PRAMEF11O60813 IGHV3-41-201ENST00000613121 348 ntBASIC18.36■□□□□ 0.53
PRAMEF11O60813 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PRAMEF11O60813 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF11O60813 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF11O60813 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF11O60813 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF11O60813 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF11O60813 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF11O60813 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF11O60813 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF11O60813 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF11O60813 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF11O60813 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF11O60813 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF11O60813 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF11O60813 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.35■□□□□ 0.53
PRAMEF11O60813 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PRAMEF11O60813 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF11O60813 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.35■□□□□ 0.53
PRAMEF11O60813 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF11O60813 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.35■□□□□ 0.53
PRAMEF11O60813 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF11O60813 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF11O60813 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.35■□□□□ 0.53
PRAMEF11O60813 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF11O60813 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF11O60813 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF11O60813 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PRAMEF11O60813 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF11O60813 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.35■□□□□ 0.53
PRAMEF11O60813 AC124864.1-201ENST00000623408 392 ntBASIC18.35■□□□□ 0.53
PRAMEF11O60813 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF11O60813 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.35■□□□□ 0.53
PRAMEF11O60813 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PRAMEF11O60813 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.35■□□□□ 0.53
PRAMEF11O60813 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF11O60813 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF11O60813 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.35■□□□□ 0.53
PRAMEF11O60813 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.35■□□□□ 0.53
PRAMEF11O60813 AC020763.4-201ENST00000623414 4170 ntBASIC18.35■□□□□ 0.53
PRAMEF11O60813 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF11O60813 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF11O60813 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF11O60813 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
PRAMEF11O60813 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF11O60813 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF11O60813 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF11O60813 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.34■□□□□ 0.53
PRAMEF11O60813 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF11O60813 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.34■□□□□ 0.53
PRAMEF11O60813 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.34■□□□□ 0.53
PRAMEF11O60813 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF11O60813 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.34■□□□□ 0.53
PRAMEF11O60813 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF11O60813 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms