Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF17Q5VTA0 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.29■□□□□ 0.36
PRAMEF17Q5VTA0 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF17Q5VTA0 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF17Q5VTA0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF17Q5VTA0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF17Q5VTA0 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF17Q5VTA0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF17Q5VTA0 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF17Q5VTA0 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.29■□□□□ 0.36
PRAMEF17Q5VTA0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF17Q5VTA0 TSPY19P-201ENST00000418461 509 ntBASIC17.29■□□□□ 0.36
PRAMEF17Q5VTA0 TSPY18P-201ENST00000441642 509 ntBASIC17.29■□□□□ 0.36
PRAMEF17Q5VTA0 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.29■□□□□ 0.36
PRAMEF17Q5VTA0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.29■□□□□ 0.36
PRAMEF17Q5VTA0 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF17Q5VTA0 AC099336.1-202ENST00000602961 463 ntBASIC17.29■□□□□ 0.36
PRAMEF17Q5VTA0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.29■□□□□ 0.36
PRAMEF17Q5VTA0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.29■□□□□ 0.36
PRAMEF17Q5VTA0 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF17Q5VTA0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF17Q5VTA0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.29■□□□□ 0.36
PRAMEF17Q5VTA0 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF17Q5VTA0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.29■□□□□ 0.36
PRAMEF17Q5VTA0 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF17Q5VTA0 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF17Q5VTA0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF17Q5VTA0 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF17Q5VTA0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF17Q5VTA0 CROCCP3-202ENST00000420820 1947 ntBASIC17.29■□□□□ 0.36
PRAMEF17Q5VTA0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF17Q5VTA0 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF17Q5VTA0 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF17Q5VTA0 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF17Q5VTA0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF17Q5VTA0 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.28■□□□□ 0.36
PRAMEF17Q5VTA0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.28■□□□□ 0.36
PRAMEF17Q5VTA0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PRAMEF17Q5VTA0 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF17Q5VTA0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF17Q5VTA0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF17Q5VTA0 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF17Q5VTA0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF17Q5VTA0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
PRAMEF17Q5VTA0 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.28■□□□□ 0.36
PRAMEF17Q5VTA0 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF17Q5VTA0 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.28■□□□□ 0.36
PRAMEF17Q5VTA0 IGHV3-47-201ENST00000425060 335 ntBASIC17.28■□□□□ 0.36
PRAMEF17Q5VTA0 AC246785.2-201ENST00000432512 513 ntBASIC17.28■□□□□ 0.36
PRAMEF17Q5VTA0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.28■□□□□ 0.36
PRAMEF17Q5VTA0 KRT17P6-201ENST00000453795 1220 ntBASIC17.28■□□□□ 0.36
PRAMEF17Q5VTA0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.28■□□□□ 0.36
PRAMEF17Q5VTA0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.28■□□□□ 0.36
PRAMEF17Q5VTA0 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF17Q5VTA0 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.28■□□□□ 0.36
PRAMEF17Q5VTA0 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.28■□□□□ 0.36
PRAMEF17Q5VTA0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.28■□□□□ 0.36
PRAMEF17Q5VTA0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF17Q5VTA0 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF17Q5VTA0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF17Q5VTA0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF17Q5VTA0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF17Q5VTA0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
PRAMEF17Q5VTA0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.28■□□□□ 0.36
PRAMEF17Q5VTA0 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF17Q5VTA0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF17Q5VTA0 AL031598.1-201ENST00000561511 1773 ntBASIC17.28■□□□□ 0.36
PRAMEF17Q5VTA0 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.27■□□□□ 0.36
PRAMEF17Q5VTA0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF17Q5VTA0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF17Q5VTA0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF17Q5VTA0 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF17Q5VTA0 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF17Q5VTA0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF17Q5VTA0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF17Q5VTA0 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF17Q5VTA0 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.27■□□□□ 0.36
PRAMEF17Q5VTA0 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.27■□□□□ 0.36
PRAMEF17Q5VTA0 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.27■□□□□ 0.36
PRAMEF17Q5VTA0 EMBP1-201ENST00000458200 901 ntBASIC17.27■□□□□ 0.36
PRAMEF17Q5VTA0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.27■□□□□ 0.36
PRAMEF17Q5VTA0 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF17Q5VTA0 AC111152.3-201ENST00000569699 673 ntBASIC17.27■□□□□ 0.36
PRAMEF17Q5VTA0 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.27■□□□□ 0.36
PRAMEF17Q5VTA0 Z69720.1-201ENST00000601483 472 ntBASIC17.27■□□□□ 0.36
PRAMEF17Q5VTA0 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF17Q5VTA0 AC098818.2-201ENST00000564925 2320 ntBASIC17.27■□□□□ 0.35
PRAMEF17Q5VTA0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PRAMEF17Q5VTA0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PRAMEF17Q5VTA0 LINC00602-201ENST00000629776 2065 ntBASIC17.27■□□□□ 0.35
PRAMEF17Q5VTA0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PRAMEF17Q5VTA0 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PRAMEF17Q5VTA0 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
PRAMEF17Q5VTA0 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF17Q5VTA0 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PRAMEF17Q5VTA0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF17Q5VTA0 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF17Q5VTA0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PRAMEF17Q5VTA0 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF17Q5VTA0 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms