Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 SIRPAP1-201ENST00000448467 1770 ntBASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 MIR6786-201ENST00000616843 113 ntBASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.09■□□□□ 0.17
COMMD4Q9H0A8 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
COMMD4Q9H0A8 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
COMMD4Q9H0A8 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
COMMD4Q9H0A8 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
COMMD4Q9H0A8 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
COMMD4Q9H0A8 PHGDH-209ENST00000641074 1780 ntBASIC16.08■□□□□ 0.17
COMMD4Q9H0A8 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.08■□□□□ 0.17
COMMD4Q9H0A8 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
COMMD4Q9H0A8 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
COMMD4Q9H0A8 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
COMMD4Q9H0A8 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
COMMD4Q9H0A8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.08■□□□□ 0.16
COMMD4Q9H0A8 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
COMMD4Q9H0A8 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.08■□□□□ 0.16
COMMD4Q9H0A8 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COMMD4Q9H0A8 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COMMD4Q9H0A8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.08■□□□□ 0.16
COMMD4Q9H0A8 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.08■□□□□ 0.16
COMMD4Q9H0A8 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.08■□□□□ 0.16
COMMD4Q9H0A8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.08■□□□□ 0.16
COMMD4Q9H0A8 AC073195.1-201ENST00000607241 877 ntBASIC16.08■□□□□ 0.16
COMMD4Q9H0A8 AC073648.6-201ENST00000641589 218 ntBASIC16.08■□□□□ 0.16
COMMD4Q9H0A8 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COMMD4Q9H0A8 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COMMD4Q9H0A8 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COMMD4Q9H0A8 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COMMD4Q9H0A8 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COMMD4Q9H0A8 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
COMMD4Q9H0A8 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.08■□□□□ 0.16
COMMD4Q9H0A8 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 AL023284.2-201ENST00000405850 579 ntBASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 AC008040.2-201ENST00000461049 708 ntBASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 B3GAT3P1-201ENST00000471720 806 ntBASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 AC006058.3-201ENST00000606217 1069 ntBASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 KRT8P50-201ENST00000562022 1438 ntBASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 FSCN1P1-201ENST00000568912 1481 ntBASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms