Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NEK1Q96PY6 AL391807.1-203ENST00000604392 2365 ntBASIC21.54■■□□□ 1.04
NEK1Q96PY6 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
NEK1Q96PY6 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NEK1Q96PY6 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NEK1Q96PY6 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NEK1Q96PY6 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NEK1Q96PY6 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
NEK1Q96PY6 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NEK1Q96PY6 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
NEK1Q96PY6 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.53■■□□□ 1.04
NEK1Q96PY6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NEK1Q96PY6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NEK1Q96PY6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NEK1Q96PY6 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NEK1Q96PY6 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NEK1Q96PY6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NEK1Q96PY6 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NEK1Q96PY6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
NEK1Q96PY6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
NEK1Q96PY6 RNF152P1-201ENST00000397754 604 ntBASIC21.53■■□□□ 1.04
NEK1Q96PY6 AC104076.2-201ENST00000448912 469 ntBASIC21.53■■□□□ 1.04
NEK1Q96PY6 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NEK1Q96PY6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.53■■□□□ 1.04
NEK1Q96PY6 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.53■■□□□ 1.04
NEK1Q96PY6 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
NEK1Q96PY6 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NEK1Q96PY6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NEK1Q96PY6 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NEK1Q96PY6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC21.53■■□□□ 1.04
NEK1Q96PY6 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
NEK1Q96PY6 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.53■■□□□ 1.04
NEK1Q96PY6 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
NEK1Q96PY6 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
NEK1Q96PY6 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NEK1Q96PY6 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NEK1Q96PY6 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NEK1Q96PY6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NEK1Q96PY6 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.52■■□□□ 1.04
NEK1Q96PY6 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NEK1Q96PY6 NARF-204ENST00000390006 1766 ntTSL 2 BASIC21.52■■□□□ 1.04
NEK1Q96PY6 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.52■■□□□ 1.04
NEK1Q96PY6 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NEK1Q96PY6 AK4P3-201ENST00000418260 669 ntBASIC21.52■■□□□ 1.04
NEK1Q96PY6 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.52■■□□□ 1.04
NEK1Q96PY6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NEK1Q96PY6 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
NEK1Q96PY6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NEK1Q96PY6 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NEK1Q96PY6 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NEK1Q96PY6 AL136038.4-201ENST00000603606 1261 ntBASIC21.52■■□□□ 1.04
NEK1Q96PY6 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.04
NEK1Q96PY6 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
NEK1Q96PY6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.52■■□□□ 1.03
NEK1Q96PY6 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
NEK1Q96PY6 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.52■■□□□ 1.03
NEK1Q96PY6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
NEK1Q96PY6 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NEK1Q96PY6 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
NEK1Q96PY6 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
NEK1Q96PY6 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
NEK1Q96PY6 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
NEK1Q96PY6 AC132938.6-201ENST00000623828 1655 ntBASIC21.51■■□□□ 1.03
NEK1Q96PY6 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NEK1Q96PY6 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NEK1Q96PY6 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.51■■□□□ 1.03
NEK1Q96PY6 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NEK1Q96PY6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
NEK1Q96PY6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
NEK1Q96PY6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NEK1Q96PY6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.51■■□□□ 1.03
NEK1Q96PY6 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
NEK1Q96PY6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NEK1Q96PY6 AC008687.5-201ENST00000593746 558 ntBASIC21.51■■□□□ 1.03
NEK1Q96PY6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
NEK1Q96PY6 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NEK1Q96PY6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.51■■□□□ 1.03
NEK1Q96PY6 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NEK1Q96PY6 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NEK1Q96PY6 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.51■■□□□ 1.03
NEK1Q96PY6 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
NEK1Q96PY6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
NEK1Q96PY6 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
NEK1Q96PY6 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
NEK1Q96PY6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NEK1Q96PY6 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
NEK1Q96PY6 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
NEK1Q96PY6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC21.5■■□□□ 1.03
NEK1Q96PY6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.5■■□□□ 1.03
NEK1Q96PY6 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NEK1Q96PY6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC21.5■■□□□ 1.03
NEK1Q96PY6 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
NEK1Q96PY6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.5■■□□□ 1.03
NEK1Q96PY6 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NEK1Q96PY6 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
NEK1Q96PY6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC21.5■■□□□ 1.03
NEK1Q96PY6 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
NEK1Q96PY6 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
NEK1Q96PY6 SLC25A6P5-201ENST00000435663 894 ntBASIC21.5■■□□□ 1.03
NEK1Q96PY6 KRT18P38-201ENST00000449496 1282 ntBASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms