Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ZNF558Q96NG5 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF558Q96NG5 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF558Q96NG5 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
ZNF558Q96NG5 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF558Q96NG5 HLA-J-201ENST00000462773 1622 ntBASIC19.26■□□□□ 0.67
ZNF558Q96NG5 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF558Q96NG5 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ZNF558Q96NG5 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF558Q96NG5 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF558Q96NG5 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF558Q96NG5 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.26■□□□□ 0.67
ZNF558Q96NG5 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.26■□□□□ 0.67
ZNF558Q96NG5 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF558Q96NG5 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.26■□□□□ 0.67
ZNF558Q96NG5 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.26■□□□□ 0.67
ZNF558Q96NG5 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.26■□□□□ 0.67
ZNF558Q96NG5 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF558Q96NG5 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.26■□□□□ 0.67
ZNF558Q96NG5 OR7E14P-202ENST00000530490 1290 ntBASIC19.26■□□□□ 0.67
ZNF558Q96NG5 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF558Q96NG5 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF558Q96NG5 AL139288.1-201ENST00000623748 933 ntBASIC19.26■□□□□ 0.67
ZNF558Q96NG5 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF558Q96NG5 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF558Q96NG5 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF558Q96NG5 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF558Q96NG5 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF558Q96NG5 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF558Q96NG5 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.25■□□□□ 0.67
ZNF558Q96NG5 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF558Q96NG5 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF558Q96NG5 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF558Q96NG5 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF558Q96NG5 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF558Q96NG5 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF558Q96NG5 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ZNF558Q96NG5 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF558Q96NG5 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF558Q96NG5 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.25■□□□□ 0.67
ZNF558Q96NG5 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.25■□□□□ 0.67
ZNF558Q96NG5 IGHV3-22-201ENST00000520721 359 ntBASIC19.25■□□□□ 0.67
ZNF558Q96NG5 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
ZNF558Q96NG5 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.25■□□□□ 0.67
ZNF558Q96NG5 AC145285.3-201ENST00000564603 959 ntBASIC19.25■□□□□ 0.67
ZNF558Q96NG5 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ZNF558Q96NG5 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF558Q96NG5 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF558Q96NG5 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF558Q96NG5 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF558Q96NG5 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF558Q96NG5 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF558Q96NG5 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF558Q96NG5 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF558Q96NG5 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNF558Q96NG5 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF558Q96NG5 AC104109.2-201ENST00000602919 1418 ntBASIC19.25■□□□□ 0.67
ZNF558Q96NG5 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF558Q96NG5 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ZNF558Q96NG5 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.24■□□□□ 0.67
ZNF558Q96NG5 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF558Q96NG5 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF558Q96NG5 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF558Q96NG5 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF558Q96NG5 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.24■□□□□ 0.67
ZNF558Q96NG5 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF558Q96NG5 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF558Q96NG5 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF558Q96NG5 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF558Q96NG5 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.24■□□□□ 0.67
ZNF558Q96NG5 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.24■□□□□ 0.67
ZNF558Q96NG5 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.24■□□□□ 0.67
ZNF558Q96NG5 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.24■□□□□ 0.67
ZNF558Q96NG5 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF558Q96NG5 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.24■□□□□ 0.67
ZNF558Q96NG5 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.24■□□□□ 0.67
ZNF558Q96NG5 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF558Q96NG5 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF558Q96NG5 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF558Q96NG5 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF558Q96NG5 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF558Q96NG5 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.23■□□□□ 0.67
ZNF558Q96NG5 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF558Q96NG5 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.23■□□□□ 0.67
ZNF558Q96NG5 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ZNF558Q96NG5 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF558Q96NG5 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF558Q96NG5 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF558Q96NG5 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.23■□□□□ 0.67
ZNF558Q96NG5 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ZNF558Q96NG5 AC092910.1-201ENST00000482027 1129 ntBASIC19.23■□□□□ 0.67
ZNF558Q96NG5 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.23■□□□□ 0.67
ZNF558Q96NG5 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.23■□□□□ 0.67
ZNF558Q96NG5 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNF558Q96NG5 AC025062.2-201ENST00000605477 670 ntBASIC19.23■□□□□ 0.67
ZNF558Q96NG5 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF558Q96NG5 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNF558Q96NG5 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
ZNF558Q96NG5 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
ZNF558Q96NG5 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms