Protein–RNA interactions for Protein: Q8TDM0

BCAS4, Breast carcinoma-amplified sequence 4, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4Q8TDM0 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BCAS4Q8TDM0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BCAS4Q8TDM0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BCAS4Q8TDM0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BCAS4Q8TDM0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.3■□□□□ 0.52
BCAS4Q8TDM0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.3■□□□□ 0.52
BCAS4Q8TDM0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.3■□□□□ 0.52
BCAS4Q8TDM0 AC106739.1-201ENST00000617035 715 ntBASIC18.3■□□□□ 0.52
BCAS4Q8TDM0 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
BCAS4Q8TDM0 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BCAS4Q8TDM0 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.3■□□□□ 0.52
BCAS4Q8TDM0 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.3■□□□□ 0.52
BCAS4Q8TDM0 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BCAS4Q8TDM0 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.3■□□□□ 0.52
BCAS4Q8TDM0 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BCAS4Q8TDM0 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BCAS4Q8TDM0 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BCAS4Q8TDM0 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
BCAS4Q8TDM0 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.3■□□□□ 0.52
BCAS4Q8TDM0 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BCAS4Q8TDM0 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
BCAS4Q8TDM0 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
BCAS4Q8TDM0 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BCAS4Q8TDM0 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.29■□□□□ 0.52
BCAS4Q8TDM0 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
BCAS4Q8TDM0 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
BCAS4Q8TDM0 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BCAS4Q8TDM0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.29■□□□□ 0.52
BCAS4Q8TDM0 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BCAS4Q8TDM0 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BCAS4Q8TDM0 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
BCAS4Q8TDM0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
BCAS4Q8TDM0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BCAS4Q8TDM0 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
BCAS4Q8TDM0 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
BCAS4Q8TDM0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.29■□□□□ 0.52
BCAS4Q8TDM0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.29■□□□□ 0.52
BCAS4Q8TDM0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.29■□□□□ 0.52
BCAS4Q8TDM0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BCAS4Q8TDM0 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BCAS4Q8TDM0 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
BCAS4Q8TDM0 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.29■□□□□ 0.52
BCAS4Q8TDM0 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BCAS4Q8TDM0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
BCAS4Q8TDM0 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
BCAS4Q8TDM0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.29■□□□□ 0.52
BCAS4Q8TDM0 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.29■□□□□ 0.52
BCAS4Q8TDM0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
BCAS4Q8TDM0 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BCAS4Q8TDM0 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BCAS4Q8TDM0 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BCAS4Q8TDM0 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BCAS4Q8TDM0 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BCAS4Q8TDM0 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BCAS4Q8TDM0 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BCAS4Q8TDM0 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.28■□□□□ 0.52
BCAS4Q8TDM0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
BCAS4Q8TDM0 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
BCAS4Q8TDM0 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
BCAS4Q8TDM0 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
BCAS4Q8TDM0 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BCAS4Q8TDM0 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BCAS4Q8TDM0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BCAS4Q8TDM0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BCAS4Q8TDM0 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
BCAS4Q8TDM0 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.28■□□□□ 0.52
BCAS4Q8TDM0 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BCAS4Q8TDM0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BCAS4Q8TDM0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BCAS4Q8TDM0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
BCAS4Q8TDM0 KRT19P1-201ENST00000405746 1186 ntBASIC18.28■□□□□ 0.52
BCAS4Q8TDM0 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.28■□□□□ 0.52
BCAS4Q8TDM0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.28■□□□□ 0.52
BCAS4Q8TDM0 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.28■□□□□ 0.52
BCAS4Q8TDM0 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
BCAS4Q8TDM0 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BCAS4Q8TDM0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
BCAS4Q8TDM0 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
BCAS4Q8TDM0 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BCAS4Q8TDM0 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BCAS4Q8TDM0 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
BCAS4Q8TDM0 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
BCAS4Q8TDM0 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.27■□□□□ 0.52
BCAS4Q8TDM0 LINC01126-201ENST00000623515 1646 ntBASIC18.27■□□□□ 0.52
BCAS4Q8TDM0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BCAS4Q8TDM0 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
BCAS4Q8TDM0 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
BCAS4Q8TDM0 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.27■□□□□ 0.52
BCAS4Q8TDM0 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
BCAS4Q8TDM0 GMCL1P1-201ENST00000463439 1581 ntBASIC18.27■□□□□ 0.52
BCAS4Q8TDM0 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
BCAS4Q8TDM0 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
BCAS4Q8TDM0 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
BCAS4Q8TDM0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
BCAS4Q8TDM0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BCAS4Q8TDM0 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
BCAS4Q8TDM0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.27■□□□□ 0.52
BCAS4Q8TDM0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.27■□□□□ 0.52
BCAS4Q8TDM0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.27■□□□□ 0.52
BCAS4Q8TDM0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms