Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 SLC38A3-202ENST00000417851 438 ntTSL 313.53□□□□□ -0.246e-9■□□□□ 9.8
SND1Q7KZF4 ISYNA1-204ENST00000577916 2148 ntTSL 527.04■■□□□ 1.926e-8■□□□□ 9.8
SND1Q7KZF4 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.856e-8■□□□□ 9.8
SND1Q7KZF4 ISYNA1-211ENST00000582811 2039 ntTSL 223.61■■□□□ 1.376e-8■□□□□ 9.8
SND1Q7KZF4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.276e-8■□□□□ 9.8
SND1Q7KZF4 NDUFS2-214ENST00000496133 815 ntTSL 522.21■■□□□ 1.156e-8■□□□□ 9.8
SND1Q7KZF4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.121e-7■□□□□ 9.8
SND1Q7KZF4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.87■■□□□ 1.096e-8■□□□□ 9.8
SND1Q7KZF4 NDUFS2-204ENST00000467295 1060 ntTSL 321.74■■□□□ 1.076e-8■□□□□ 9.8
SND1Q7KZF4 NDUFS2-215ENST00000496553 888 ntTSL 221.74■■□□□ 1.076e-8■□□□□ 9.8
SND1Q7KZF4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 16e-8■□□□□ 9.8
SND1Q7KZF4 NDUFS2-208ENST00000478866 1076 ntTSL 220.3■□□□□ 0.846e-8■□□□□ 9.8
SND1Q7KZF4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.85■□□□□ 0.776e-8■□□□□ 9.8
SND1Q7KZF4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.756e-8■□□□□ 9.8
SND1Q7KZF4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.676e-8■□□□□ 9.8
SND1Q7KZF4 ISYNA1-209ENST00000582287 696 ntTSL 1 (best)19.11■□□□□ 0.656e-8■□□□□ 9.8
SND1Q7KZF4 ISYNA1-210ENST00000582770 1654 ntTSL 218.66■□□□□ 0.586e-8■□□□□ 9.8
SND1Q7KZF4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.23■□□□□ 0.516e-8■□□□□ 9.8
SND1Q7KZF4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.436e-8■□□□□ 9.8
SND1Q7KZF4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.36e-8■□□□□ 9.8
SND1Q7KZF4 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.266e-8■□□□□ 9.8
SND1Q7KZF4 NFE2-205ENST00000553198 1208 ntTSL 515.8■□□□□ 0.126e-8■□□□□ 9.8
SND1Q7KZF4 ISYNA1-214ENST00000583816 860 ntTSL 315.15■□□□□ 0.026e-8■□□□□ 9.8
SND1Q7KZF4 ISYNA1-203ENST00000577820 1466 ntTSL 514.87□□□□□ -0.036e-8■□□□□ 9.8
SND1Q7KZF4 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.076e-8■□□□□ 9.8
SND1Q7KZF4 RBX1-202ENST00000467617 1871 ntTSL 214.18□□□□□ -0.146e-8■□□□□ 9.8
SND1Q7KZF4 FAH-211ENST00000561353 324 ntTSL 512.69□□□□□ -0.386e-8■□□□□ 9.8
SND1Q7KZF4 ISYNA1-212ENST00000583309 371 ntTSL 212.53□□□□□ -0.46e-8■□□□□ 9.8
SND1Q7KZF4 GATA1-201ENST00000376665 1140 ntTSL 5 BASIC12.48□□□□□ -0.411e-7■□□□□ 9.8
SND1Q7KZF4 NDUFS2-206ENST00000473321 555 ntTSL 211.95□□□□□ -0.56e-8■□□□□ 9.8
SND1Q7KZF4 FAH-209ENST00000559217 619 ntTSL 210.5□□□□□ -0.736e-8■□□□□ 9.8
SND1Q7KZF4 ISYNA1-207ENST00000581672 793 ntTSL 210.38□□□□□ -0.756e-8■□□□□ 9.8
SND1Q7KZF4 FAH-204ENST00000539156 3427 ntTSL 1 (best) BASIC9.91□□□□□ -0.826e-8■□□□□ 9.8
SND1Q7KZF4 CCT2-214ENST00000553169 758 ntTSL 29.11□□□□□ -0.957e-8■□□□□ 9.8
SND1Q7KZF4 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.996e-8■□□□□ 9.8
SND1Q7KZF4 ENPP3-207ENST00000494023 632 ntTSL 38.21□□□□□ -1.16e-8■□□□□ 9.8
SND1Q7KZF4 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC7.99□□□□□ -1.136e-8■□□□□ 9.8
SND1Q7KZF4 TOMM20-203ENST00000473132 365 ntTSL 27.66□□□□□ -1.186e-8■□□□□ 9.8
SND1Q7KZF4 TOMM20-202ENST00000467767 377 ntTSL 35.97□□□□□ -1.456e-8■□□□□ 9.8
SND1Q7KZF4 LMNB1-207ENST00000494185 579 ntTSL 24.19□□□□□ -1.746e-8■□□□□ 9.8
SND1Q7KZF4 LMAN1-203ENST00000587918 678 ntTSL 26.89□□□□□ -1.311e-24■□□□□ 9.8
SND1Q7KZF4 FCGRT-215ENST00000598936 870 ntTSL 316.97■□□□□ 0.313e-13■□□□□ 9.8
SND1Q7KZF4 FCGRT-216ENST00000599701 579 ntTSL 216.27■□□□□ 0.23e-13■□□□□ 9.8
SND1Q7KZF4 FCGRT-207ENST00000595677 714 ntTSL 515.08■□□□□ 03e-13■□□□□ 9.8
SND1Q7KZF4 MDH2-202ENST00000424167 681 ntTSL 212.91□□□□□ -0.342e-11■□□□□ 9.8
SND1Q7KZF4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.632e-17■□□□□ 9.8
SND1Q7KZF4 ACTB-207ENST00000462494 2245 ntTSL 518.63■□□□□ 0.572e-17■□□□□ 9.8
SND1Q7KZF4 ACTB-204ENST00000425660 1845 ntTSL 1 (best)15.87■□□□□ 0.132e-17■□□□□ 9.8
SND1Q7KZF4 ACTB-213ENST00000493945 1236 ntTSL 515.62■□□□□ 0.092e-17■□□□□ 9.8
SND1Q7KZF4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.03■■□□□ 1.761e-19■□□□□ 9.8
SND1Q7KZF4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.671e-19■□□□□ 9.8
SND1Q7KZF4 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.141e-19■□□□□ 9.8
SND1Q7KZF4 UBA52-202ENST00000442744 2845 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.231e-19■□□□□ 9.8
SND1Q7KZF4 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.261e-19■□□□□ 9.8
SND1Q7KZF4 UBA52-213ENST00000599551 707 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.451e-19■□□□□ 9.8
SND1Q7KZF4 UBA52-207ENST00000596273 764 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.641e-19■□□□□ 9.8
SND1Q7KZF4 UBA52-201ENST00000430157 572 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.821e-19■□□□□ 9.8
SND1Q7KZF4 UBA52-205ENST00000595683 779 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.831e-19■□□□□ 9.8
SND1Q7KZF4 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.011e-19■□□□□ 9.8
SND1Q7KZF4 UBA52-203ENST00000594527 357 ntTSL 36.59□□□□□ -1.351e-19■□□□□ 9.8
SND1Q7KZF4 UBA52-206ENST00000596272 508 ntTSL 25.85□□□□□ -1.471e-19■□□□□ 9.8
SND1Q7KZF4 GPRC5C-211ENST00000582873 393 ntTSL 324.52■■□□□ 1.522e-10■□□□□ 9.8
SND1Q7KZF4 GPRC5C-206ENST00000482723 2317 ntTSL 218.5■□□□□ 0.552e-10■□□□□ 9.8
SND1Q7KZF4 PGD-203ENST00000465632 642 ntTSL 213.81□□□□□ -0.29e-8■□□□□ 9.8
SND1Q7KZF4 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.325e-13■□□□□ 9.8
SND1Q7KZF4 ATP5F1-205ENST00000483994 678 ntTSL 2 BASIC11.14□□□□□ -0.635e-13■□□□□ 9.8
SND1Q7KZF4 ATP5F1-201ENST00000369721 1040 ntTSL 28.17□□□□□ -1.15e-13■□□□□ 9.8
SND1Q7KZF4 ATP5F1-204ENST00000468818 859 ntTSL 36.63□□□□□ -1.355e-13■□□□□ 9.8
SND1Q7KZF4 TMEM173-210ENST00000511886 826 ntTSL 513.81□□□□□ -0.27e-10■□□□□ 9.8
SND1Q7KZF4 MYH9-208ENST00000475726 768 ntTSL 316.12■□□□□ 0.178e-10■□□□□ 9.8
SND1Q7KZF4 STT3A-210ENST00000527606 569 ntTSL 416.06■□□□□ 0.167e-11■□□□□ 9.7
SND1Q7KZF4 STT3A-204ENST00000525652 607 ntTSL 28.18□□□□□ -1.17e-11■□□□□ 9.7
SND1Q7KZF4 STT3A-212ENST00000529886 542 ntTSL 47.99□□□□□ -1.137e-11■□□□□ 9.7
SND1Q7KZF4 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.054e-7■□□□□ 9.7
SND1Q7KZF4 PRPF8-201ENST00000304992 7295 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.624e-7■□□□□ 9.7
SND1Q7KZF4 TXNIP-203ENST00000488537 1509 ntTSL 57.29□□□□□ -1.243e-10■□□□□ 9.7
SND1Q7KZF4 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.62□□□□□ -1.513e-10■□□□□ 9.7
SND1Q7KZF4 TMEM59L-203ENST00000594859 1557 ntTSL 1 (best)19.2■□□□□ 0.665e-6■□□□□ 9.7
SND1Q7KZF4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.18■□□□□ 0.665e-6■□□□□ 9.7
SND1Q7KZF4 GPC1-205ENST00000427506 573 ntTSL 319.04■□□□□ 0.645e-6■□□□□ 9.7
SND1Q7KZF4 ERBB2-212ENST00000582788 2004 ntTSL 518.91■□□□□ 0.625e-6■□□□□ 9.7
SND1Q7KZF4 FLNA-211ENST00000465144 398 ntTSL 218.77■□□□□ 0.65e-6■□□□□ 9.7
SND1Q7KZF4 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.74■□□□□ 0.599e-9■□□□□ 9.7
SND1Q7KZF4 ERBB2-211ENST00000582648 1013 ntTSL 518.63■□□□□ 0.575e-6■□□□□ 9.7
SND1Q7KZF4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.45■□□□□ 0.549e-9■□□□□ 9.7
SND1Q7KZF4 ERBB2-214ENST00000583038 4930 ntTSL 218.08■□□□□ 0.485e-6■□□□□ 9.7
SND1Q7KZF4 L1CAM-216ENST00000496122 561 ntTSL 417.97■□□□□ 0.475e-6■□□□□ 9.7
SND1Q7KZF4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.325e-6■□□□□ 9.7
SND1Q7KZF4 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.189e-9■□□□□ 9.7
SND1Q7KZF4 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 05e-6■□□□□ 9.7
SND1Q7KZF4 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC14.56□□□□□ -0.085e-6■□□□□ 9.7
SND1Q7KZF4 ERBB2-203ENST00000445658 3238 ntTSL 2 BASIC13.91□□□□□ -0.185e-6■□□□□ 9.7
SND1Q7KZF4 ERBB2-219ENST00000584601 4792 ntTSL 2 BASIC13.63□□□□□ -0.235e-6■□□□□ 9.7
SND1Q7KZF4 BMP4-205ENST00000558984 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.235e-6■□□□□ 9.7
SND1Q7KZF4 ERBB2-201ENST00000269571 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.235e-6■□□□□ 9.7
SND1Q7KZF4 ERBB2-206ENST00000578373 4523 ntTSL 1 (best)13.49□□□□□ -0.255e-6■□□□□ 9.7
SND1Q7KZF4 ERBB2-218ENST00000584450 3730 ntTSL 1 (best) BASIC13.24□□□□□ -0.295e-6■□□□□ 9.7
SND1Q7KZF4 BMP4-202ENST00000417573 1784 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.325e-6■□□□□ 9.7
SND1Q7KZF4 ERBB2-204ENST00000541774 4341 ntTSL 5 BASIC12.5□□□□□ -0.415e-6■□□□□ 9.7
SND1Q7KZF4 BMP4-207ENST00000559501 1112 ntTSL 211.57□□□□□ -0.565e-6■□□□□ 9.7
Retrieved 100 of 13,567 protein–RNA pairs in 417 ms