RNA–Protein interactions for RNA: ENST00000596272.5

UBA52-206, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, humanhuman

TSL 2

Gene UBA52, Length 508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52-206ENST00000596272 NISCHQ9Y2I1 1504 aa14.86□□□□□ -0.03
UBA52-206ENST00000596272 ABCC9O60706 1549 aa14.73□□□□□ -0.05
UBA52-206ENST00000596272 DNAJC5BQ9UF47 199 aa14.7□□□□□ -0.06
UBA52-206ENST00000596272 DNAJC5Q9H3Z4 198 aa14.19□□□□□ -0.14
UBA52-206ENST00000596272 CCDC180Q9P1Z9 1646 aa13.64□□□□□ -0.23
UBA52-206ENST00000596272 PABPN1Q86U42 306 aaKnown RBP eCLIP13.64□□□□□ -0.23
UBA52-206ENST00000596272 RB1CC1Q8TDY2 1594 aa13.54□□□□□ -0.24
UBA52-206ENST00000596272 CECR2Q9BXF3 1484 aa13.36□□□□□ -0.27
UBA52-206ENST00000596272 AEBP2Q6ZN18 517 aaPredicted RBP13.29□□□□□ -0.28
UBA52-206ENST00000596272 TRIM41Q8WV44 630 aa13.26□□□□□ -0.29
UBA52-206ENST00000596272 NACADO15069 1562 aa13.2□□□□□ -0.3
UBA52-206ENST00000596272 CC2D2AQ9P2K1 1620 aa13.19□□□□□ -0.3
UBA52-206ENST00000596272 DCAF8L2P0C7V8 631 aa13.18□□□□□ -0.3
UBA52-206ENST00000596272 BICRAQ9NZM4 1560 aa13.13□□□□□ -0.31
UBA52-206ENST00000596272 UNC13AQ9UPW8 1703 aa13.1□□□□□ -0.31
UBA52-206ENST00000596272 CUX2O14529 1486 aa13.03□□□□□ -0.32
UBA52-206ENST00000596272 CHIC1Q5VXU3 224 aa12.98□□□□□ -0.33
UBA52-206ENST00000596272 EIF4G1Q04637 1599 aaKnown RBP12.92□□□□□ -0.34
UBA52-206ENST00000596272 SHROOM4Q9ULL8 1493 aa12.84□□□□□ -0.35
UBA52-206ENST00000596272 ERCC6Q03468 1493 aa12.81□□□□□ -0.36
UBA52-206ENST00000596272 MYO15BQ96JP2 1530 aa12.65□□□□□ -0.38
UBA52-206ENST00000596272 SCRIBQ14160 1630 aa12.52□□□□□ -0.4
UBA52-206ENST00000596272 TRHP20396 242 aaPredicted RBP12.42□□□□□ -0.42
UBA52-206ENST00000596272 OSCARQ8IYS5 282 aa12.4□□□□□ -0.42
UBA52-206ENST00000596272 ILDR1Q86SU0 546 aaPredicted RBP12.36□□□□□ -0.43
UBA52-206ENST00000596272 NESP48681 1621 aa12.36□□□□□ -0.43
UBA52-206ENST00000596272 THOC2Q8NI27 1593 aaKnown RBP12.33□□□□□ -0.44
UBA52-206ENST00000596272 SMARCA2P51531 1590 aa12.25□□□□□ -0.45
UBA52-206ENST00000596272 BAZ1AQ9NRL2 1556 aaPredicted RBP12.24□□□□□ -0.45
UBA52-206ENST00000596272 NCAPD3P42695 1498 aa12.22□□□□□ -0.45
UBA52-206ENST00000596272 RIMBP3CA6NJZ7 1639 aa12.22□□□□□ -0.45
UBA52-206ENST00000596272 RIMBP3BA6NNM3 1639 aa12.22□□□□□ -0.45
UBA52-206ENST00000596272 RIMBP3Q9UFD9 1639 aa12.22□□□□□ -0.45
UBA52-206ENST00000596272 CYB5RLQ6IPT4 315 aa12.2□□□□□ -0.46
UBA52-206ENST00000596272 DCAF1Q9Y4B6 1507 aa12.15□□□□□ -0.46
UBA52-206ENST00000596272 PDS5BQ9NTI5 1447 aa12.11□□□□□ -0.47
UBA52-206ENST00000596272 ARHGEF11O15085 1522 aa12.1□□□□□ -0.47
UBA52-206ENST00000596272 KIF21AQ7Z4S6 1674 aa12.08□□□□□ -0.48
UBA52-206ENST00000596272 ZCCHC6Q5VYS8 1495 aaKnown RBP12.08□□□□□ -0.48
UBA52-206ENST00000596272 LAMC3Q9Y6N6 1575 aa12.06□□□□□ -0.48
UBA52-206ENST00000596272 ATAD2BQ9ULI0 1458 aa12.06□□□□□ -0.48
UBA52-206ENST00000596272 MRC2Q9UBG0 1479 aa12.02□□□□□ -0.48
UBA52-206ENST00000596272 HMGXB3Q12766 1538 aa11.99□□□□□ -0.49
UBA52-206ENST00000596272 WDR62O43379 1518 aa11.98□□□□□ -0.49
UBA52-206ENST00000596272 ARAP1Q96P48 1450 aa11.91□□□□□ -0.5
UBA52-206ENST00000596272 BAZ1BQ9UIG0 1483 aaKnown RBP11.9□□□□□ -0.5
UBA52-206ENST00000596272 CADPSQ9ULU8 1353 aa11.85□□□□□ -0.51
UBA52-206ENST00000596272 CEP164Q9UPV0 1460 aa11.79□□□□□ -0.52
UBA52-206ENST00000596272 SMARCA4P51532 1647 aa11.75□□□□□ -0.53
UBA52-206ENST00000596272 RSF1Q96T23 1441 aaPredicted RBP11.72□□□□□ -0.53
UBA52-206ENST00000596272 KDM4FA0A1W2PPD8 638 aa11.72□□□□□ -0.53
UBA52-206ENST00000596272 FBLN2P98095 1184 aa11.71□□□□□ -0.53
UBA52-206ENST00000596272 FANCD2Q9BXW9 1451 aa11.7□□□□□ -0.54
UBA52-206ENST00000596272 ZNF608Q9ULD9 1512 aaPredicted RBP11.67□□□□□ -0.54
UBA52-206ENST00000596272 FBXO41Q8TF61 875 aa11.67□□□□□ -0.54
UBA52-206ENST00000596272 LMTK3Q96Q04 1460 aa11.65□□□□□ -0.54
UBA52-206ENST00000596272 URB2Q14146 1524 aaKnown RBP11.64□□□□□ -0.55
UBA52-206ENST00000596272 SOCS7O14512 581 aa11.61□□□□□ -0.55
UBA52-206ENST00000596272 PEG3Q9GZU2 1588 aa11.61□□□□□ -0.55
UBA52-206ENST00000596272 IFT140Q96RY7 1462 aa11.59□□□□□ -0.55
UBA52-206ENST00000596272 CHD1O14646 1710 aa11.57□□□□□ -0.56
UBA52-206ENST00000596272 ERCC6L2Q5T890 1561 aa11.54□□□□□ -0.56
UBA52-206ENST00000596272 ILDR2Q71H61 639 aa11.52□□□□□ -0.57
UBA52-206ENST00000596272 EIF4G3O43432 1585 aaKnown RBP11.5□□□□□ -0.57
UBA52-206ENST00000596272 AQRO60306 1485 aaKnown RBP eCLIP11.49□□□□□ -0.572e-11■■■■■ 45
UBA52-206ENST00000596272 HECW2Q9P2P5 1572 aa11.47□□□□□ -0.57
UBA52-206ENST00000596272 CFTRP13569 1480 aa11.47□□□□□ -0.57
UBA52-206ENST00000596272 GAPVD1Q14C86 1478 aa11.47□□□□□ -0.57
UBA52-206ENST00000596272 PHF23Q9BUL5 403 aaPredicted RBP11.45□□□□□ -0.58
UBA52-206ENST00000596272 MROH2BQ7Z745 1585 aa11.45□□□□□ -0.58
UBA52-206ENST00000596272 CLASP1Q7Z460 1538 aa11.44□□□□□ -0.58
UBA52-206ENST00000596272 CHMP7Q8WUX9 453 aaPredicted RBP11.43□□□□□ -0.58
UBA52-206ENST00000596272 DISP3Q9P2K9 1392 aa11.42□□□□□ -0.58
UBA52-206ENST00000596272 SYNJ2O15056 1496 aa11.38□□□□□ -0.59
UBA52-206ENST00000596272 SYNJ1O43426 1573 aa11.38□□□□□ -0.59
UBA52-206ENST00000596272 FAM69CQ0P6D2 419 aa11.38□□□□□ -0.59
UBA52-206ENST00000596272 TOPBP1Q92547 1522 aa11.35□□□□□ -0.59
UBA52-206ENST00000596272 ADGRL1O94910 1474 aa11.34□□□□□ -0.59
UBA52-206ENST00000596272 KIF13AQ9H1H9 1805 aa11.33□□□□□ -0.6
UBA52-206ENST00000596272 KDM6BO15054 1643 aa11.33□□□□□ -0.6
UBA52-206ENST00000596272 SNAPC4Q5SXM2 1469 aa11.31□□□□□ -0.6
UBA52-206ENST00000596272 TDRD9Q8NDG6 1382 aaKnown RBP11.28□□□□□ -0.6
UBA52-206ENST00000596272 TARBP1Q13395 1621 aaKnown RBP11.27□□□□□ -0.6
UBA52-206ENST00000596272 ABCC8Q09428 1581 aa11.27□□□□□ -0.61
UBA52-206ENST00000596272 ABCC10Q5T3U5 1492 aa11.25□□□□□ -0.61
UBA52-206ENST00000596272 WIZO95785 1651 aa11.24□□□□□ -0.61
UBA52-206ENST00000596272 NPM1P06748 294 aaKnown RBP eCLIP11.23□□□□□ -0.61
UBA52-206ENST00000596272 SENP3Q9H4L4 574 aaPredicted RBP11.21□□□□□ -0.61
UBA52-206ENST00000596272 MAGI1Q96QZ7 1491 aaPredicted RBP11.2□□□□□ -0.62
UBA52-206ENST00000596272 DNMBPQ6XZF7 1577 aa11.2□□□□□ -0.62
UBA52-206ENST00000596272 RAD54L2Q9Y4B4 1467 aa11.19□□□□□ -0.62
UBA52-206ENST00000596272 SOGA1O94964 1423 aa11.18□□□□□ -0.62
UBA52-206ENST00000596272 POLA1P09884 1462 aaPredicted RBP11.17□□□□□ -0.62
UBA52-206ENST00000596272 GRIN2BQ13224 1484 aa11.14□□□□□ -0.63
UBA52-206ENST00000596272 DIP2BQ9P265 1576 aa11.14□□□□□ -0.63
UBA52-206ENST00000596272 PRDM2Q13029 1718 aa11.12□□□□□ -0.63
UBA52-206ENST00000596272 CEP170Q5SW79 1584 aa11.11□□□□□ -0.63
UBA52-206ENST00000596272 CERKQ8TCT0 537 aa11.1□□□□□ -0.63
UBA52-206ENST00000596272 SPATA31D1Q6ZQQ2 1576 aa11.1□□□□□ -0.63
UBA52-206ENST00000596272 TSPOAP1O95153 1857 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms