RNA–Protein interactions for RNA: ENST00000597451.5

UBA52-209, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA52, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52-209ENST00000597451 CHIC1Q5VXU3 224 aa17.63■□□□□ 0.41
UBA52-209ENST00000597451 AEBP2Q6ZN18 517 aaPredicted RBP17.1■□□□□ 0.33
UBA52-209ENST00000597451 PHF23Q9BUL5 403 aaPredicted RBP15.59■□□□□ 0.09
UBA52-209ENST00000597451 PLPPR3Q6T4P5 718 aa14.74□□□□□ -0.05
UBA52-209ENST00000597451 SENP3Q9H4L4 574 aaPredicted RBP14.4□□□□□ -0.1
UBA52-209ENST00000597451 NISCHQ9Y2I1 1504 aa14.29□□□□□ -0.12
UBA52-209ENST00000597451 EHMT2Q96KQ7 1210 aa14.02□□□□□ -0.17
UBA52-209ENST00000597451 ABCC9O60706 1549 aa13.99□□□□□ -0.17
UBA52-209ENST00000597451 KCNA4P22459 653 aa13.82□□□□□ -0.2
UBA52-209ENST00000597451 DNAJC5BQ9UF47 199 aa13.81□□□□□ -0.2
UBA52-209ENST00000597451 ADRA2BP18089 450 aa13.73□□□□□ -0.21
UBA52-209ENST00000597451 PPP6R1Q9UPN7 881 aa13.45□□□□□ -0.26
UBA52-209ENST00000597451 CSRNP3Q8WYN3 585 aa13.43□□□□□ -0.26
UBA52-209ENST00000597451 SLC4A1APQ9BWU0 796 aaKnown RBP13.35□□□□□ -0.27
UBA52-209ENST00000597451 FOXD1Q16676 465 aa13.23□□□□□ -0.29
UBA52-209ENST00000597451 DNAJC5Q9H3Z4 198 aa13.18□□□□□ -0.3
UBA52-209ENST00000597451 CCDC180Q9P1Z9 1646 aa13.14□□□□□ -0.31
UBA52-209ENST00000597451 PPP4R3CPQ6ZMV5 832 aa13.1□□□□□ -0.31
UBA52-209ENST00000597451 NCBP3Q53F19 620 aaKnown RBP13.04□□□□□ -0.32
UBA52-209ENST00000597451 SLC24A1O60721 1099 aa12.94□□□□□ -0.34
UBA52-209ENST00000597451 PABPN1Q86U42 306 aaKnown RBP eCLIP12.9□□□□□ -0.34
UBA52-209ENST00000597451 RB1CC1Q8TDY2 1594 aa12.89□□□□□ -0.35
UBA52-209ENST00000597451 NPM3O75607 178 aaKnown RBP12.83□□□□□ -0.36
UBA52-209ENST00000597451 ZBTB22O15209 634 aa12.73□□□□□ -0.37
UBA52-209ENST00000597451 PIAS4Q8N2W9 510 aaPredicted RBP12.71□□□□□ -0.37
UBA52-209ENST00000597451 AMER1Q5JTC6 1135 aaPredicted RBP12.66□□□□□ -0.38
UBA52-209ENST00000597451 UNC13AQ9UPW8 1703 aa12.65□□□□□ -0.38
UBA52-209ENST00000597451 CECR2Q9BXF3 1484 aa12.65□□□□□ -0.38
UBA52-209ENST00000597451 RTN4Q9NQC3 1192 aaKnown RBP12.63□□□□□ -0.39
UBA52-209ENST00000597451 NACADO15069 1562 aa12.6□□□□□ -0.39
UBA52-209ENST00000597451 BICRAQ9NZM4 1560 aa12.59□□□□□ -0.39
UBA52-209ENST00000597451 CC2D2AQ9P2K1 1620 aa12.56□□□□□ -0.4
UBA52-209ENST00000597451 CNKSR2Q8WXI2 1034 aa12.52□□□□□ -0.41
UBA52-209ENST00000597451 FOXD4L1Q9NU39 408 aa12.48□□□□□ -0.41
UBA52-209ENST00000597451 DCAF8L2P0C7V8 631 aa12.45□□□□□ -0.42
UBA52-209ENST00000597451 SCAF1Q9H7N4 1312 aaKnown RBP12.38□□□□□ -0.43
UBA52-209ENST00000597451 TRIM41Q8WV44 630 aa12.36□□□□□ -0.43
UBA52-209ENST00000597451 EIF4G1Q04637 1599 aaKnown RBP12.33□□□□□ -0.44
UBA52-209ENST00000597451 CUX2O14529 1486 aa12.29□□□□□ -0.44
UBA52-209ENST00000597451 SHROOM4Q9ULL8 1493 aa12.24□□□□□ -0.45
UBA52-209ENST00000597451 MYO15BQ96JP2 1530 aa12.12□□□□□ -0.47
UBA52-209ENST00000597451 ERCC6Q03468 1493 aa12.1□□□□□ -0.47
UBA52-209ENST00000597451 FKBP8Q14318 412 aa12.08□□□□□ -0.48
UBA52-209ENST00000597451 RNF216Q9NWF9 866 aaPredicted RBP12.06□□□□□ -0.48
UBA52-209ENST00000597451 SCRIBQ14160 1630 aa12.01□□□□□ -0.49
UBA52-209ENST00000597451 ATXN8OSP0DMR3 200 aa11.98□□□□□ -0.49
UBA52-209ENST00000597451 MAPK8IP2Q13387 824 aaPredicted RBP11.96□□□□□ -0.49
UBA52-209ENST00000597451 MSH5O43196 834 aa11.87□□□□□ -0.51
UBA52-209ENST00000597451 SLC4A2P04920 1241 aa11.87□□□□□ -0.51
UBA52-209ENST00000597451 MYCNP04198 464 aaPredicted RBP11.84□□□□□ -0.51
UBA52-209ENST00000597451 NESP48681 1621 aa11.81□□□□□ -0.52
UBA52-209ENST00000597451 THOC2Q8NI27 1593 aaKnown RBP11.8□□□□□ -0.52
UBA52-209ENST00000597451 HOXD11P31277 338 aaPredicted RBP11.76□□□□□ -0.53
UBA52-209ENST00000597451 SMARCA2P51531 1590 aa11.71□□□□□ -0.54
UBA52-209ENST00000597451 DCAF1Q9Y4B6 1507 aa11.7□□□□□ -0.54
UBA52-209ENST00000597451 ZCCHC6Q5VYS8 1495 aaKnown RBP11.69□□□□□ -0.54
UBA52-209ENST00000597451 BAZ1AQ9NRL2 1556 aaPredicted RBP11.65□□□□□ -0.54
UBA52-209ENST00000597451 NCAPD3P42695 1498 aa11.64□□□□□ -0.55
UBA52-209ENST00000597451 DMRT2Q9Y5R5 561 aa11.64□□□□□ -0.55
UBA52-209ENST00000597451 PLCB2Q00722 1185 aa11.62□□□□□ -0.55
UBA52-209ENST00000597451 KIF21AQ7Z4S6 1674 aa11.6□□□□□ -0.55
UBA52-209ENST00000597451 OSCARQ8IYS5 282 aa11.6□□□□□ -0.55
UBA52-209ENST00000597451 RIMBP3CA6NJZ7 1639 aa11.6□□□□□ -0.55
UBA52-209ENST00000597451 RIMBP3BA6NNM3 1639 aa11.6□□□□□ -0.55
UBA52-209ENST00000597451 RIMBP3Q9UFD9 1639 aa11.6□□□□□ -0.55
UBA52-209ENST00000597451 TRHP20396 242 aaPredicted RBP11.56□□□□□ -0.56
UBA52-209ENST00000597451 ATAD2BQ9ULI0 1458 aa11.53□□□□□ -0.56
UBA52-209ENST00000597451 LAMC3Q9Y6N6 1575 aa11.5□□□□□ -0.57
UBA52-209ENST00000597451 HMGXB3Q12766 1538 aa11.5□□□□□ -0.57
UBA52-209ENST00000597451 BCANQ96GW7 911 aa11.48□□□□□ -0.57
UBA52-209ENST00000597451 ARHGEF11O15085 1522 aa11.47□□□□□ -0.57
UBA52-209ENST00000597451 PDS5BQ9NTI5 1447 aa11.46□□□□□ -0.57
UBA52-209ENST00000597451 ILDR1Q86SU0 546 aaPredicted RBP11.46□□□□□ -0.57
UBA52-209ENST00000597451 HAP1P54257 671 aaPredicted RBP11.45□□□□□ -0.58
UBA52-209ENST00000597451 MRC2Q9UBG0 1479 aa11.44□□□□□ -0.58
UBA52-209ENST00000597451 FBXO3Q9UK99 471 aa11.44□□□□□ -0.58
UBA52-209ENST00000597451 WDR62O43379 1518 aa11.44□□□□□ -0.58
UBA52-209ENST00000597451 CYB5RLQ6IPT4 315 aa11.43□□□□□ -0.58
UBA52-209ENST00000597451 ATF5Q9Y2D1 282 aaPredicted RBP11.43□□□□□ -0.58
UBA52-209ENST00000597451 BAZ1BQ9UIG0 1483 aaKnown RBP11.38□□□□□ -0.59
UBA52-209ENST00000597451 PRKCSHP14314 528 aaPredicted RBP11.37□□□□□ -0.59
UBA52-209ENST00000597451 TAOK2Q9UL54 1235 aa11.35□□□□□ -0.59
UBA52-209ENST00000597451 VSIG10Q8N0Z9 540 aa11.34□□□□□ -0.59
UBA52-209ENST00000597451 SMARCA4P51532 1647 aa11.34□□□□□ -0.59
UBA52-209ENST00000597451 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.33□□□□□ -0.6
UBA52-209ENST00000597451 HNRNPUL2Q1KMD3 747 aaKnown RBP11.33□□□□□ -0.6
UBA52-209ENST00000597451 SAMD1Q6SPF0 538 aaPredicted RBP11.33□□□□□ -0.6
UBA52-209ENST00000597451 ARAP1Q96P48 1450 aa11.32□□□□□ -0.6
UBA52-209ENST00000597451 CADPSQ9ULU8 1353 aa11.27□□□□□ -0.61
UBA52-209ENST00000597451 CEP164Q9UPV0 1460 aa11.25□□□□□ -0.61
UBA52-209ENST00000597451 VASPP50552 380 aaPredicted RBP11.22□□□□□ -0.61
UBA52-209ENST00000597451 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.21□□□□□ -0.615e-7■□□□□ 8.7
UBA52-209ENST00000597451 SPDYE4A6NLX3 237 aa11.2□□□□□ -0.62
UBA52-209ENST00000597451 PEG3Q9GZU2 1588 aa11.18□□□□□ -0.62
UBA52-209ENST00000597451 FANCD2Q9BXW9 1451 aa11.17□□□□□ -0.62
UBA52-209ENST00000597451 TPRNQ4KMQ1 711 aa11.16□□□□□ -0.62
UBA52-209ENST00000597451 PROM2Q8N271 834 aa11.16□□□□□ -0.62
UBA52-209ENST00000597451 ZNF219Q9P2Y4 722 aaPredicted RBP11.16□□□□□ -0.62
UBA52-209ENST00000597451 URB2Q14146 1524 aaKnown RBP11.15□□□□□ -0.62
UBA52-209ENST00000597451 ZNF608Q9ULD9 1512 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms