RNA–Protein interactions for RNA: ENST00000594527.1

UBA52-203, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, humanhuman

TSL 3

Gene UBA52, Length 357 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52-203ENST00000594527 NISCHQ9Y2I1 1504 aa16.57■□□□□ 0.24
UBA52-203ENST00000594527 AEBP2Q6ZN18 517 aaPredicted RBP15.89■□□□□ 0.13
UBA52-203ENST00000594527 CHIC1Q5VXU3 224 aa15.71■□□□□ 0.11
UBA52-203ENST00000594527 ABCC9O60706 1549 aa15.68■□□□□ 0.1
UBA52-203ENST00000594527 DNAJC5BQ9UF47 199 aa15.37■□□□□ 0.05
UBA52-203ENST00000594527 CCDC180Q9P1Z9 1646 aa14.97□□□□□ -0.01
UBA52-203ENST00000594527 RB1CC1Q8TDY2 1594 aa14.61□□□□□ -0.07
UBA52-203ENST00000594527 PABPN1Q86U42 306 aaKnown RBP eCLIP14.59□□□□□ -0.07
UBA52-203ENST00000594527 DNAJC5Q9H3Z4 198 aa14.54□□□□□ -0.08
UBA52-203ENST00000594527 NACADO15069 1562 aa14.4□□□□□ -0.1
UBA52-203ENST00000594527 DCAF8L2P0C7V8 631 aa14.28□□□□□ -0.12
UBA52-203ENST00000594527 BICRAQ9NZM4 1560 aa14.24□□□□□ -0.13
UBA52-203ENST00000594527 CECR2Q9BXF3 1484 aa14.22□□□□□ -0.13
UBA52-203ENST00000594527 UNC13AQ9UPW8 1703 aa14.09□□□□□ -0.15
UBA52-203ENST00000594527 CC2D2AQ9P2K1 1620 aa14.08□□□□□ -0.15
UBA52-203ENST00000594527 MYO15BQ96JP2 1530 aa14.07□□□□□ -0.16
UBA52-203ENST00000594527 SHROOM4Q9ULL8 1493 aa14.03□□□□□ -0.16
UBA52-203ENST00000594527 EIF4G1Q04637 1599 aaKnown RBP13.93□□□□□ -0.18
UBA52-203ENST00000594527 PHF23Q9BUL5 403 aaPredicted RBP13.83□□□□□ -0.2
UBA52-203ENST00000594527 CUX2O14529 1486 aa13.78□□□□□ -0.2
UBA52-203ENST00000594527 SCRIBQ14160 1630 aa13.68□□□□□ -0.22
UBA52-203ENST00000594527 DCAF1Q9Y4B6 1507 aa13.65□□□□□ -0.22
UBA52-203ENST00000594527 ZCCHC6Q5VYS8 1495 aaKnown RBP13.6□□□□□ -0.23
UBA52-203ENST00000594527 TRIM41Q8WV44 630 aa13.58□□□□□ -0.24
UBA52-203ENST00000594527 ERCC6Q03468 1493 aa13.57□□□□□ -0.24
UBA52-203ENST00000594527 SENP3Q9H4L4 574 aaPredicted RBP13.45□□□□□ -0.26
UBA52-203ENST00000594527 NCAPD3P42695 1498 aa13.4□□□□□ -0.26
UBA52-203ENST00000594527 NESP48681 1621 aa13.31□□□□□ -0.28
UBA52-203ENST00000594527 ATAD2BQ9ULI0 1458 aa13.24□□□□□ -0.29
UBA52-203ENST00000594527 THOC2Q8NI27 1593 aaKnown RBP13.21□□□□□ -0.29
UBA52-203ENST00000594527 HMGXB3Q12766 1538 aa13.15□□□□□ -0.3
UBA52-203ENST00000594527 OSCARQ8IYS5 282 aa13.12□□□□□ -0.31
UBA52-203ENST00000594527 PDS5BQ9NTI5 1447 aa13.11□□□□□ -0.31
UBA52-203ENST00000594527 SMARCA2P51531 1590 aa13.11□□□□□ -0.31
UBA52-203ENST00000594527 LAMC3Q9Y6N6 1575 aa13.07□□□□□ -0.32
UBA52-203ENST00000594527 BAZ1BQ9UIG0 1483 aaKnown RBP13.04□□□□□ -0.32
UBA52-203ENST00000594527 MRC2Q9UBG0 1479 aa12.99□□□□□ -0.33
UBA52-203ENST00000594527 SMARCA4P51532 1647 aa12.97□□□□□ -0.33
UBA52-203ENST00000594527 BAZ1AQ9NRL2 1556 aaPredicted RBP12.97□□□□□ -0.33
UBA52-203ENST00000594527 CADPSQ9ULU8 1353 aa12.96□□□□□ -0.33
UBA52-203ENST00000594527 WDR62O43379 1518 aa12.96□□□□□ -0.33
UBA52-203ENST00000594527 KIF21AQ7Z4S6 1674 aa12.95□□□□□ -0.34
UBA52-203ENST00000594527 PEG3Q9GZU2 1588 aa12.9□□□□□ -0.34
UBA52-203ENST00000594527 TRHP20396 242 aaPredicted RBP12.86□□□□□ -0.35
UBA52-203ENST00000594527 RIMBP3CA6NJZ7 1639 aa12.85□□□□□ -0.35
UBA52-203ENST00000594527 RIMBP3BA6NNM3 1639 aa12.85□□□□□ -0.35
UBA52-203ENST00000594527 RIMBP3Q9UFD9 1639 aa12.85□□□□□ -0.35
UBA52-203ENST00000594527 PLPPR3Q6T4P5 718 aa12.85□□□□□ -0.35
UBA52-203ENST00000594527 CYB5RLQ6IPT4 315 aa12.84□□□□□ -0.35
UBA52-203ENST00000594527 ARHGEF11O15085 1522 aa12.82□□□□□ -0.36
UBA52-203ENST00000594527 CEP164Q9UPV0 1460 aa12.8□□□□□ -0.36
UBA52-203ENST00000594527 FANCD2Q9BXW9 1451 aa12.77□□□□□ -0.37
UBA52-203ENST00000594527 MROH2BQ7Z745 1585 aa12.75□□□□□ -0.37
UBA52-203ENST00000594527 URB2Q14146 1524 aaKnown RBP12.69□□□□□ -0.38
UBA52-203ENST00000594527 CFTRP13569 1480 aa12.67□□□□□ -0.38
UBA52-203ENST00000594527 ARAP1Q96P48 1450 aa12.67□□□□□ -0.38
UBA52-203ENST00000594527 ZNF608Q9ULD9 1512 aaPredicted RBP12.64□□□□□ -0.39
UBA52-203ENST00000594527 IFT140Q96RY7 1462 aa12.6□□□□□ -0.39
UBA52-203ENST00000594527 RSF1Q96T23 1441 aaPredicted RBP12.59□□□□□ -0.39
UBA52-203ENST00000594527 FBLN2P98095 1184 aa12.51□□□□□ -0.41
UBA52-203ENST00000594527 ILDR1Q86SU0 546 aaPredicted RBP12.49□□□□□ -0.41
UBA52-203ENST00000594527 WIZO95785 1651 aa12.48□□□□□ -0.41
UBA52-203ENST00000594527 AQRO60306 1485 aaKnown RBP eCLIP12.47□□□□□ -0.412e-11■■■■■ 45
UBA52-203ENST00000594527 FOXD1Q16676 465 aa12.45□□□□□ -0.42
UBA52-203ENST00000594527 TOPBP1Q92547 1522 aa12.44□□□□□ -0.42
UBA52-203ENST00000594527 EIF4G3O43432 1585 aaKnown RBP12.43□□□□□ -0.42
UBA52-203ENST00000594527 ABCC8Q09428 1581 aa12.38□□□□□ -0.43
UBA52-203ENST00000594527 CHD1O14646 1710 aa12.36□□□□□ -0.43
UBA52-203ENST00000594527 CLASP1Q7Z460 1538 aa12.36□□□□□ -0.43
UBA52-203ENST00000594527 CHMP7Q8WUX9 453 aaPredicted RBP12.34□□□□□ -0.43
UBA52-203ENST00000594527 TARBP1Q13395 1621 aaKnown RBP12.33□□□□□ -0.43
UBA52-203ENST00000594527 TOP2AP11388 1531 aaKnown RBP12.33□□□□□ -0.44
UBA52-203ENST00000594527 TDRD9Q8NDG6 1382 aaKnown RBP12.32□□□□□ -0.44
UBA52-203ENST00000594527 GAPVD1Q14C86 1478 aa12.32□□□□□ -0.44
UBA52-203ENST00000594527 DNMBPQ6XZF7 1577 aa12.3□□□□□ -0.44
UBA52-203ENST00000594527 POLA1P09884 1462 aaPredicted RBP12.29□□□□□ -0.44
UBA52-203ENST00000594527 SNAPC4Q5SXM2 1469 aa12.28□□□□□ -0.44
UBA52-203ENST00000594527 KDM4FA0A1W2PPD8 638 aa12.27□□□□□ -0.45
UBA52-203ENST00000594527 CCDC88BA6NC98 1476 aa12.27□□□□□ -0.45
UBA52-203ENST00000594527 RAD54L2Q9Y4B4 1467 aa12.27□□□□□ -0.45
UBA52-203ENST00000594527 SYNJ1O43426 1573 aa12.26□□□□□ -0.45
UBA52-203ENST00000594527 SOGA1O94964 1423 aa12.26□□□□□ -0.45
UBA52-203ENST00000594527 MAGI1Q96QZ7 1491 aaPredicted RBP12.23□□□□□ -0.45
UBA52-203ENST00000594527 SYNJ2O15056 1496 aa12.21□□□□□ -0.45
UBA52-203ENST00000594527 GRIN2BQ13224 1484 aa12.2□□□□□ -0.46
UBA52-203ENST00000594527 PRDM2Q13029 1718 aa12.17□□□□□ -0.46
UBA52-203ENST00000594527 WDR97A6NE52 1622 aa12.15□□□□□ -0.47
UBA52-203ENST00000594527 ADRA2BP18089 450 aa12.14□□□□□ -0.47
UBA52-203ENST00000594527 PPP6R1Q9UPN7 881 aa12.14□□□□□ -0.47
UBA52-203ENST00000594527 FAM69CQ0P6D2 419 aa12.12□□□□□ -0.47
UBA52-203ENST00000594527 ERCC6L2Q5T890 1561 aa12.12□□□□□ -0.47
UBA52-203ENST00000594527 FGD5Q6ZNL6 1462 aa12.11□□□□□ -0.47
UBA52-203ENST00000594527 ABCC10Q5T3U5 1492 aa12.08□□□□□ -0.48
UBA52-203ENST00000594527 NUP160Q12769 1436 aa12.04□□□□□ -0.48
UBA52-203ENST00000594527 CEP170Q5SW79 1584 aa12.04□□□□□ -0.48
UBA52-203ENST00000594527 GRIN2AQ12879 1464 aa12.02□□□□□ -0.49
UBA52-203ENST00000594527 CUX1P39880 1505 aa12.01□□□□□ -0.49
UBA52-203ENST00000594527 KIF13AQ9H1H9 1805 aa12□□□□□ -0.49
UBA52-203ENST00000594527 NPM1P06748 294 aaKnown RBP eCLIP12□□□□□ -0.49
UBA52-203ENST00000594527 FBXO41Q8TF61 875 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms