Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.29■□□□□ 0.36
LRIT2A6NDA9 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.29■□□□□ 0.36
LRIT2A6NDA9 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRIT2A6NDA9 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRIT2A6NDA9 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRIT2A6NDA9 KRT18P48-201ENST00000434763 852 ntBASIC17.29■□□□□ 0.36
LRIT2A6NDA9 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.29■□□□□ 0.36
LRIT2A6NDA9 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRIT2A6NDA9 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.29■□□□□ 0.36
LRIT2A6NDA9 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.29■□□□□ 0.36
LRIT2A6NDA9 VENTXP5-201ENST00000523979 775 ntBASIC17.29■□□□□ 0.36
LRIT2A6NDA9 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
LRIT2A6NDA9 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LRIT2A6NDA9 AL590326.2-201ENST00000625139 305 ntBASIC17.29■□□□□ 0.36
LRIT2A6NDA9 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRIT2A6NDA9 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.29■□□□□ 0.36
LRIT2A6NDA9 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LRIT2A6NDA9 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LRIT2A6NDA9 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRIT2A6NDA9 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.29■□□□□ 0.36
LRIT2A6NDA9 NOC2LP1-202ENST00000452600 2235 ntBASIC17.29■□□□□ 0.36
LRIT2A6NDA9 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
LRIT2A6NDA9 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRIT2A6NDA9 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.29■□□□□ 0.36
LRIT2A6NDA9 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LRIT2A6NDA9 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRIT2A6NDA9 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRIT2A6NDA9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
LRIT2A6NDA9 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LRIT2A6NDA9 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRIT2A6NDA9 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRIT2A6NDA9 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIT2A6NDA9 AC026471.1-201ENST00000564629 3026 ntBASIC17.28■□□□□ 0.36
LRIT2A6NDA9 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIT2A6NDA9 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LRIT2A6NDA9 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRIT2A6NDA9 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIT2A6NDA9 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIT2A6NDA9 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIT2A6NDA9 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIT2A6NDA9 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.28■□□□□ 0.36
LRIT2A6NDA9 AL031133.1-201ENST00000406807 723 ntBASIC17.28■□□□□ 0.36
LRIT2A6NDA9 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRIT2A6NDA9 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIT2A6NDA9 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
LRIT2A6NDA9 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.28■□□□□ 0.36
LRIT2A6NDA9 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.28■□□□□ 0.36
LRIT2A6NDA9 NTF6B-201ENST00000591913 560 ntBASIC17.28■□□□□ 0.36
LRIT2A6NDA9 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
LRIT2A6NDA9 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIT2A6NDA9 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIT2A6NDA9 AC132938.6-201ENST00000623828 1655 ntBASIC17.28■□□□□ 0.36
LRIT2A6NDA9 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
LRIT2A6NDA9 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIT2A6NDA9 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIT2A6NDA9 LINC00167-201ENST00000530583 1419 ntBASIC17.28■□□□□ 0.36
LRIT2A6NDA9 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.28■□□□□ 0.36
LRIT2A6NDA9 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIT2A6NDA9 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIT2A6NDA9 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRIT2A6NDA9 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.28■□□□□ 0.36
LRIT2A6NDA9 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIT2A6NDA9 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LRIT2A6NDA9 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
LRIT2A6NDA9 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.27■□□□□ 0.36
LRIT2A6NDA9 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LRIT2A6NDA9 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LRIT2A6NDA9 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LRIT2A6NDA9 FLJ13224-201ENST00000313737 1514 ntBASIC17.27■□□□□ 0.36
LRIT2A6NDA9 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRIT2A6NDA9 LINC00602-201ENST00000629776 2065 ntBASIC17.27■□□□□ 0.36
LRIT2A6NDA9 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LRIT2A6NDA9 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.27■□□□□ 0.36
LRIT2A6NDA9 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRIT2A6NDA9 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LRIT2A6NDA9 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRIT2A6NDA9 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRIT2A6NDA9 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.27■□□□□ 0.36
LRIT2A6NDA9 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.27■□□□□ 0.36
LRIT2A6NDA9 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.27■□□□□ 0.36
LRIT2A6NDA9 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.27■□□□□ 0.36
LRIT2A6NDA9 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.27■□□□□ 0.36
LRIT2A6NDA9 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.27■□□□□ 0.36
LRIT2A6NDA9 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.27■□□□□ 0.36
LRIT2A6NDA9 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
LRIT2A6NDA9 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.27■□□□□ 0.36
LRIT2A6NDA9 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
LRIT2A6NDA9 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRIT2A6NDA9 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRIT2A6NDA9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
LRIT2A6NDA9 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LRIT2A6NDA9 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LRIT2A6NDA9 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRIT2A6NDA9 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.27■□□□□ 0.35
LRIT2A6NDA9 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LRIT2A6NDA9 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRIT2A6NDA9 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRIT2A6NDA9 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRIT2A6NDA9 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.26■□□□□ 0.35
LRIT2A6NDA9 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms