Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.34■□□□□ 0.37
LRCH1Q9Y2L9 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRCH1Q9Y2L9 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRCH1Q9Y2L9 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRCH1Q9Y2L9 SLC29A4P1-201ENST00000398760 971 ntBASIC17.34■□□□□ 0.37
LRCH1Q9Y2L9 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.34■□□□□ 0.37
LRCH1Q9Y2L9 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.34■□□□□ 0.37
LRCH1Q9Y2L9 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRCH1Q9Y2L9 AC083906.2-201ENST00000511578 360 ntBASIC17.34■□□□□ 0.37
LRCH1Q9Y2L9 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRCH1Q9Y2L9 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRCH1Q9Y2L9 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.34■□□□□ 0.37
LRCH1Q9Y2L9 LINC00554-201ENST00000564841 3011 ntBASIC17.34■□□□□ 0.37
LRCH1Q9Y2L9 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.34■□□□□ 0.37
LRCH1Q9Y2L9 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
LRCH1Q9Y2L9 AC008556.1-201ENST00000610908 2040 ntBASIC17.34■□□□□ 0.37
LRCH1Q9Y2L9 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRCH1Q9Y2L9 AC106886.4-201ENST00000623557 2502 ntBASIC17.34■□□□□ 0.37
LRCH1Q9Y2L9 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.34■□□□□ 0.37
LRCH1Q9Y2L9 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
LRCH1Q9Y2L9 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRCH1Q9Y2L9 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRCH1Q9Y2L9 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRCH1Q9Y2L9 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.34■□□□□ 0.37
LRCH1Q9Y2L9 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRCH1Q9Y2L9 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
LRCH1Q9Y2L9 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LRCH1Q9Y2L9 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LRCH1Q9Y2L9 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRCH1Q9Y2L9 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
LRCH1Q9Y2L9 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.33■□□□□ 0.37
LRCH1Q9Y2L9 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRCH1Q9Y2L9 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.37
LRCH1Q9Y2L9 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
LRCH1Q9Y2L9 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRCH1Q9Y2L9 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRCH1Q9Y2L9 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.37
LRCH1Q9Y2L9 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRCH1Q9Y2L9 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LRCH1Q9Y2L9 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.33■□□□□ 0.36
LRCH1Q9Y2L9 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRCH1Q9Y2L9 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRCH1Q9Y2L9 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRCH1Q9Y2L9 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.33■□□□□ 0.36
LRCH1Q9Y2L9 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.33■□□□□ 0.36
LRCH1Q9Y2L9 AL591742.1-201ENST00000604433 565 ntBASIC17.33■□□□□ 0.36
LRCH1Q9Y2L9 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.33■□□□□ 0.36
LRCH1Q9Y2L9 OR10C1-204ENST00000622521 1039 ntBASIC17.33■□□□□ 0.36
LRCH1Q9Y2L9 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.33■□□□□ 0.36
LRCH1Q9Y2L9 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRCH1Q9Y2L9 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
LRCH1Q9Y2L9 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRCH1Q9Y2L9 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRCH1Q9Y2L9 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
LRCH1Q9Y2L9 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.33■□□□□ 0.36
LRCH1Q9Y2L9 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
LRCH1Q9Y2L9 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRCH1Q9Y2L9 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRCH1Q9Y2L9 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRCH1Q9Y2L9 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
LRCH1Q9Y2L9 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
LRCH1Q9Y2L9 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRCH1Q9Y2L9 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRCH1Q9Y2L9 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRCH1Q9Y2L9 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LRCH1Q9Y2L9 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRCH1Q9Y2L9 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRCH1Q9Y2L9 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LRCH1Q9Y2L9 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRCH1Q9Y2L9 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRCH1Q9Y2L9 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.32■□□□□ 0.36
LRCH1Q9Y2L9 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.32■□□□□ 0.36
LRCH1Q9Y2L9 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRCH1Q9Y2L9 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.32■□□□□ 0.36
LRCH1Q9Y2L9 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.32■□□□□ 0.36
LRCH1Q9Y2L9 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.32■□□□□ 0.36
LRCH1Q9Y2L9 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRCH1Q9Y2L9 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
LRCH1Q9Y2L9 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.32■□□□□ 0.36
LRCH1Q9Y2L9 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.32■□□□□ 0.36
LRCH1Q9Y2L9 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRCH1Q9Y2L9 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRCH1Q9Y2L9 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRCH1Q9Y2L9 CROCCP2-202ENST00000412962 2773 ntBASIC17.32■□□□□ 0.36
LRCH1Q9Y2L9 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRCH1Q9Y2L9 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRCH1Q9Y2L9 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRCH1Q9Y2L9 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LRCH1Q9Y2L9 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 MTMR9LP-203ENST00000426597 1545 ntBASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LRCH1Q9Y2L9 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 161.1 ms