Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC13.46□□□□□ -0.25
ODF3Q96PU9 LINC01126-201ENST00000623515 1646 ntBASIC13.46□□□□□ -0.25
ODF3Q96PU9 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
ODF3Q96PU9 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
ODF3Q96PU9 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ODF3Q96PU9 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
ODF3Q96PU9 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ODF3Q96PU9 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ODF3Q96PU9 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ODF3Q96PU9 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ODF3Q96PU9 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ODF3Q96PU9 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
ODF3Q96PU9 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
ODF3Q96PU9 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ODF3Q96PU9 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC13.46□□□□□ -0.25
ODF3Q96PU9 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ODF3Q96PU9 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
ODF3Q96PU9 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ODF3Q96PU9 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC13.46□□□□□ -0.25
ODF3Q96PU9 SEC1P-202ENST00000473944 940 ntBASIC13.46□□□□□ -0.25
ODF3Q96PU9 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC13.46□□□□□ -0.25
ODF3Q96PU9 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC13.46□□□□□ -0.25
ODF3Q96PU9 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC13.46□□□□□ -0.25
ODF3Q96PU9 REEP1-209ENST00000541910 969 ntTSL 2 BASIC13.46□□□□□ -0.25
ODF3Q96PU9 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
ODF3Q96PU9 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
ODF3Q96PU9 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC13.46□□□□□ -0.25
ODF3Q96PU9 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ODF3Q96PU9 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
ODF3Q96PU9 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ODF3Q96PU9 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ODF3Q96PU9 AL133373.2-201ENST00000623187 2828 ntBASIC13.46□□□□□ -0.25
ODF3Q96PU9 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ODF3Q96PU9 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC13.46□□□□□ -0.26
ODF3Q96PU9 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC13.46□□□□□ -0.26
ODF3Q96PU9 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
ODF3Q96PU9 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC13.46□□□□□ -0.26
ODF3Q96PU9 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
ODF3Q96PU9 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ODF3Q96PU9 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ODF3Q96PU9 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
ODF3Q96PU9 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC13.45□□□□□ -0.26
ODF3Q96PU9 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ODF3Q96PU9 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ODF3Q96PU9 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC13.45□□□□□ -0.26
ODF3Q96PU9 GNE-204ENST00000539208 2190 ntTSL 2 BASIC13.45□□□□□ -0.26
ODF3Q96PU9 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
ODF3Q96PU9 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ODF3Q96PU9 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC13.45□□□□□ -0.26
ODF3Q96PU9 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
ODF3Q96PU9 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ODF3Q96PU9 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ODF3Q96PU9 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC13.45□□□□□ -0.26
ODF3Q96PU9 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
ODF3Q96PU9 AC018470.1-201ENST00000624790 3129 ntBASIC13.45□□□□□ -0.26
ODF3Q96PU9 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
ODF3Q96PU9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ODF3Q96PU9 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ODF3Q96PU9 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ODF3Q96PU9 MMP23A-201ENST00000234610 1017 ntBASIC13.45□□□□□ -0.26
ODF3Q96PU9 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
ODF3Q96PU9 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC13.45□□□□□ -0.26
ODF3Q96PU9 GAD2-202ENST00000376248 680 ntTSL 5 BASIC13.45□□□□□ -0.26
ODF3Q96PU9 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
ODF3Q96PU9 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
ODF3Q96PU9 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC13.45□□□□□ -0.26
ODF3Q96PU9 AC009947.2-201ENST00000444014 672 ntBASIC13.45□□□□□ -0.26
ODF3Q96PU9 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC13.45□□□□□ -0.26
ODF3Q96PU9 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
ODF3Q96PU9 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ODF3Q96PU9 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC13.45□□□□□ -0.26
ODF3Q96PU9 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ODF3Q96PU9 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC13.45□□□□□ -0.26
ODF3Q96PU9 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ODF3Q96PU9 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC13.45□□□□□ -0.26
ODF3Q96PU9 AC010947.1-201ENST00000623454 693 ntBASIC13.45□□□□□ -0.26
ODF3Q96PU9 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ODF3Q96PU9 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ODF3Q96PU9 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ODF3Q96PU9 OR6D1P-202ENST00000641007 5290 ntBASIC13.45□□□□□ -0.26
ODF3Q96PU9 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC13.45□□□□□ -0.26
ODF3Q96PU9 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC13.45□□□□□ -0.26
ODF3Q96PU9 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC13.45□□□□□ -0.26
ODF3Q96PU9 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ODF3Q96PU9 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC13.45□□□□□ -0.26
ODF3Q96PU9 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ODF3Q96PU9 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ODF3Q96PU9 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
ODF3Q96PU9 AP000997.3-201ENST00000623333 2250 ntBASIC13.44□□□□□ -0.26
ODF3Q96PU9 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ODF3Q96PU9 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ODF3Q96PU9 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ODF3Q96PU9 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ODF3Q96PU9 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ODF3Q96PU9 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ODF3Q96PU9 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC13.44□□□□□ -0.26
ODF3Q96PU9 AC022898.2-201ENST00000616822 1312 ntBASIC13.44□□□□□ -0.26
ODF3Q96PU9 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ODF3Q96PU9 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ODF3Q96PU9 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms