Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC38Q5VT99 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
LRRC38Q5VT99 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC38Q5VT99 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.92■□□□□ 0.62
LRRC38Q5VT99 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC38Q5VT99 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.92■□□□□ 0.62
LRRC38Q5VT99 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC38Q5VT99 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC38Q5VT99 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC38Q5VT99 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC38Q5VT99 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.92■□□□□ 0.62
LRRC38Q5VT99 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.92■□□□□ 0.62
LRRC38Q5VT99 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC38Q5VT99 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC38Q5VT99 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
LRRC38Q5VT99 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.92■□□□□ 0.62
LRRC38Q5VT99 PVRIG2P-201ENST00000435460 978 ntBASIC18.92■□□□□ 0.62
LRRC38Q5VT99 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
LRRC38Q5VT99 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.92■□□□□ 0.62
LRRC38Q5VT99 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.92■□□□□ 0.62
LRRC38Q5VT99 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
LRRC38Q5VT99 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
LRRC38Q5VT99 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.92■□□□□ 0.62
LRRC38Q5VT99 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC38Q5VT99 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC38Q5VT99 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC38Q5VT99 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC38Q5VT99 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
LRRC38Q5VT99 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.92■□□□□ 0.62
LRRC38Q5VT99 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC38Q5VT99 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC38Q5VT99 AC132938.6-201ENST00000623828 1655 ntBASIC18.92■□□□□ 0.62
LRRC38Q5VT99 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.92■□□□□ 0.62
LRRC38Q5VT99 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC38Q5VT99 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
LRRC38Q5VT99 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
LRRC38Q5VT99 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC38Q5VT99 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC38Q5VT99 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
LRRC38Q5VT99 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
LRRC38Q5VT99 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC38Q5VT99 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.91■□□□□ 0.62
LRRC38Q5VT99 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC38Q5VT99 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC38Q5VT99 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC38Q5VT99 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC38Q5VT99 AL596275.1-201ENST00000423464 877 ntBASIC18.91■□□□□ 0.62
LRRC38Q5VT99 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC38Q5VT99 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC38Q5VT99 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
LRRC38Q5VT99 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
LRRC38Q5VT99 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC38Q5VT99 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC38Q5VT99 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
LRRC38Q5VT99 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
LRRC38Q5VT99 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC38Q5VT99 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC38Q5VT99 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.91■□□□□ 0.62
LRRC38Q5VT99 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.91■□□□□ 0.62
LRRC38Q5VT99 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC38Q5VT99 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC38Q5VT99 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC38Q5VT99 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC38Q5VT99 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC38Q5VT99 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
LRRC38Q5VT99 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC38Q5VT99 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.9■□□□□ 0.62
LRRC38Q5VT99 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC38Q5VT99 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.9■□□□□ 0.62
LRRC38Q5VT99 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC38Q5VT99 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC38Q5VT99 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC38Q5VT99 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC38Q5VT99 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.9■□□□□ 0.62
LRRC38Q5VT99 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.9■□□□□ 0.62
LRRC38Q5VT99 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.9■□□□□ 0.62
LRRC38Q5VT99 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC38Q5VT99 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC38Q5VT99 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
LRRC38Q5VT99 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
LRRC38Q5VT99 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC38Q5VT99 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC38Q5VT99 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC38Q5VT99 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
LRRC38Q5VT99 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC38Q5VT99 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC38Q5VT99 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.9■□□□□ 0.62
LRRC38Q5VT99 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.9■□□□□ 0.62
LRRC38Q5VT99 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC38Q5VT99 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC38Q5VT99 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
LRRC38Q5VT99 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
LRRC38Q5VT99 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
LRRC38Q5VT99 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
LRRC38Q5VT99 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC38Q5VT99 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.89■□□□□ 0.61
LRRC38Q5VT99 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.89■□□□□ 0.61
LRRC38Q5VT99 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC38Q5VT99 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC38Q5VT99 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms