Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.64■□□□□ 0.41
HLA-BQ31612 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.64■□□□□ 0.41
HLA-BQ31612 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-BQ31612 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.64■□□□□ 0.41
HLA-BQ31612 AC008735.5-201ENST00000623544 497 ntBASIC17.64■□□□□ 0.41
HLA-BQ31612 AL139288.1-201ENST00000623748 933 ntBASIC17.64■□□□□ 0.41
HLA-BQ31612 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HLA-BQ31612 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HLA-BQ31612 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-BQ31612 LINC01126-201ENST00000623515 1646 ntBASIC17.64■□□□□ 0.41
HLA-BQ31612 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.64■□□□□ 0.41
HLA-BQ31612 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.64■□□□□ 0.41
HLA-BQ31612 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.64■□□□□ 0.41
HLA-BQ31612 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HLA-BQ31612 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-BQ31612 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.64■□□□□ 0.41
HLA-BQ31612 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-BQ31612 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-BQ31612 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-BQ31612 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-BQ31612 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-BQ31612 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-BQ31612 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-BQ31612 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-BQ31612 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-BQ31612 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.63■□□□□ 0.41
HLA-BQ31612 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-BQ31612 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-BQ31612 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-BQ31612 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-BQ31612 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-BQ31612 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
HLA-BQ31612 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.63■□□□□ 0.41
HLA-BQ31612 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.63■□□□□ 0.41
HLA-BQ31612 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.63■□□□□ 0.41
HLA-BQ31612 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HLA-BQ31612 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.63■□□□□ 0.41
HLA-BQ31612 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-BQ31612 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.63■□□□□ 0.41
HLA-BQ31612 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-BQ31612 NKAPP1-205ENST00000585790 367 ntBASIC17.63■□□□□ 0.41
HLA-BQ31612 AC010327.4-202ENST00000591484 748 ntBASIC17.63■□□□□ 0.41
HLA-BQ31612 MTDHP4-201ENST00000600287 670 ntBASIC17.63■□□□□ 0.41
HLA-BQ31612 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HLA-BQ31612 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.63■□□□□ 0.41
HLA-BQ31612 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-BQ31612 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.63■□□□□ 0.41
HLA-BQ31612 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-BQ31612 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-BQ31612 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-BQ31612 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-BQ31612 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-BQ31612 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
HLA-BQ31612 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
HLA-BQ31612 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-BQ31612 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-BQ31612 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HLA-BQ31612 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-BQ31612 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.62■□□□□ 0.41
HLA-BQ31612 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.62■□□□□ 0.41
HLA-BQ31612 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-BQ31612 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.62■□□□□ 0.41
HLA-BQ31612 AC105339.3-201ENST00000560043 636 ntBASIC17.62■□□□□ 0.41
HLA-BQ31612 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.62■□□□□ 0.41
HLA-BQ31612 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-BQ31612 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-BQ31612 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-BQ31612 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-BQ31612 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-BQ31612 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-BQ31612 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-BQ31612 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-BQ31612 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-BQ31612 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HLA-BQ31612 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-BQ31612 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-BQ31612 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-BQ31612 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.61■□□□□ 0.41
HLA-BQ31612 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-BQ31612 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-BQ31612 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-BQ31612 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-BQ31612 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.61■□□□□ 0.41
HLA-BQ31612 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-BQ31612 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-BQ31612 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-BQ31612 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.61■□□□□ 0.41
HLA-BQ31612 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-BQ31612 RPSAP43-201ENST00000402237 625 ntBASIC17.61■□□□□ 0.41
HLA-BQ31612 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.61■□□□□ 0.41
HLA-BQ31612 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-BQ31612 AC112698.1-201ENST00000510299 916 ntBASIC17.61■□□□□ 0.41
HLA-BQ31612 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.61■□□□□ 0.41
HLA-BQ31612 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-BQ31612 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-BQ31612 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-BQ31612 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-BQ31612 AFG3L1P-217ENST00000557444 2447 ntBASIC17.61■□□□□ 0.41
HLA-BQ31612 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-BQ31612 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms