Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.29□□□□□ -0.12
RAB5BP61020 LYSMD4-203ENST00000378904 2122 ntBASIC14.29□□□□□ -0.12
RAB5BP61020 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5BP61020 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RAB5BP61020 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5BP61020 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5BP61020 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5BP61020 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5BP61020 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5BP61020 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
RAB5BP61020 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5BP61020 AC103724.3-201ENST00000564481 992 ntBASIC14.29□□□□□ -0.12
RAB5BP61020 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB5BP61020 AC099791.2-201ENST00000605725 427 ntBASIC14.29□□□□□ -0.12
RAB5BP61020 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RAB5BP61020 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5BP61020 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB5BP61020 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5BP61020 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RAB5BP61020 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RAB5BP61020 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
RAB5BP61020 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB5BP61020 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB5BP61020 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5BP61020 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5BP61020 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
RAB5BP61020 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5BP61020 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5BP61020 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RAB5BP61020 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5BP61020 ANKRD18DP-204ENST00000455355 1975 ntBASIC14.29□□□□□ -0.12
RAB5BP61020 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5BP61020 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5BP61020 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RAB5BP61020 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5BP61020 REXO1L9P-201ENST00000604264 2108 ntBASIC14.29□□□□□ -0.12
RAB5BP61020 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB5BP61020 AC024909.3-201ENST00000611513 2257 ntBASIC14.29□□□□□ -0.12
RAB5BP61020 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5BP61020 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5BP61020 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5BP61020 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB5BP61020 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5BP61020 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RAB5BP61020 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5BP61020 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5BP61020 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5BP61020 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5BP61020 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.28□□□□□ -0.12
RAB5BP61020 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5BP61020 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5BP61020 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5BP61020 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5BP61020 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5BP61020 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5BP61020 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5BP61020 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5BP61020 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5BP61020 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5BP61020 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC14.28□□□□□ -0.12
RAB5BP61020 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5BP61020 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC14.28□□□□□ -0.12
RAB5BP61020 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC14.28□□□□□ -0.12
RAB5BP61020 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.28□□□□□ -0.12
RAB5BP61020 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5BP61020 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5BP61020 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5BP61020 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
RAB5BP61020 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC14.28□□□□□ -0.12
RAB5BP61020 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.28□□□□□ -0.12
RAB5BP61020 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
RAB5BP61020 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC14.28□□□□□ -0.12
RAB5BP61020 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5BP61020 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RAB5BP61020 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5BP61020 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5BP61020 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5BP61020 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
RAB5BP61020 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RAB5BP61020 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.27□□□□□ -0.12
RAB5BP61020 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
RAB5BP61020 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.27□□□□□ -0.12
RAB5BP61020 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB5BP61020 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB5BP61020 AC093677.2-201ENST00000600169 1863 ntBASIC14.27□□□□□ -0.12
RAB5BP61020 ASL-203ENST00000380839 1765 ntTSL 5 BASIC14.27□□□□□ -0.12
RAB5BP61020 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RAB5BP61020 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RAB5BP61020 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RAB5BP61020 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RAB5BP61020 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
RAB5BP61020 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.27□□□□□ -0.12
RAB5BP61020 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.27□□□□□ -0.12
RAB5BP61020 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RAB5BP61020 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB5BP61020 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB5BP61020 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC14.27□□□□□ -0.13
RAB5BP61020 SMUG1P1-201ENST00000590640 811 ntBASIC14.27□□□□□ -0.13
RAB5BP61020 AC092171.4-201ENST00000609130 632 ntBASIC14.27□□□□□ -0.13
RAB5BP61020 DBET-201ENST00000630918 3363 ntBASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms