Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCNKO75909 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCNKO75909 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
CCNKO75909 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.83■□□□□ 0.12
CCNKO75909 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCNKO75909 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCNKO75909 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CCNKO75909 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCNKO75909 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.82■□□□□ 0.12
CCNKO75909 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CCNKO75909 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
CCNKO75909 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCNKO75909 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.82■□□□□ 0.12
CCNKO75909 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCNKO75909 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC15.82■□□□□ 0.12
CCNKO75909 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC15.82■□□□□ 0.12
CCNKO75909 CCDC92B-201ENST00000575506 885 ntBASIC15.82■□□□□ 0.12
CCNKO75909 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC15.82■□□□□ 0.12
CCNKO75909 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CCNKO75909 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCNKO75909 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCNKO75909 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCNKO75909 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCNKO75909 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CCNKO75909 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCNKO75909 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCNKO75909 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC15.82■□□□□ 0.12
CCNKO75909 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCNKO75909 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC15.82■□□□□ 0.12
CCNKO75909 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCNKO75909 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCNKO75909 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCNKO75909 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CCNKO75909 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCNKO75909 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCNKO75909 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCNKO75909 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCNKO75909 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCNKO75909 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.82■□□□□ 0.12
CCNKO75909 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.82■□□□□ 0.12
CCNKO75909 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCNKO75909 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNKO75909 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.81■□□□□ 0.12
CCNKO75909 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNKO75909 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.81■□□□□ 0.12
CCNKO75909 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNKO75909 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CCNKO75909 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNKO75909 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCNKO75909 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCNKO75909 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNKO75909 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNKO75909 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CCNKO75909 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNKO75909 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNKO75909 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CCNKO75909 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNKO75909 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCNKO75909 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNKO75909 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCNKO75909 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.81■□□□□ 0.12
CCNKO75909 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCNKO75909 AC006116.8-202ENST00000587620 1550 ntBASIC15.81■□□□□ 0.12
CCNKO75909 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC15.81■□□□□ 0.12
CCNKO75909 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNKO75909 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNKO75909 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNKO75909 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CCNKO75909 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNKO75909 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNKO75909 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCNKO75909 AL499627.1-201ENST00000569373 2188 ntBASIC15.8■□□□□ 0.12
CCNKO75909 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCNKO75909 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCNKO75909 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CCNKO75909 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCNKO75909 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
CCNKO75909 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.8■□□□□ 0.12
CCNKO75909 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCNKO75909 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CCNKO75909 AC104417.2-201ENST00000562989 1793 ntBASIC15.8■□□□□ 0.12
CCNKO75909 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.8■□□□□ 0.12
CCNKO75909 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCNKO75909 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCNKO75909 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCNKO75909 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CCNKO75909 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCNKO75909 NME4-202ENST00000382940 766 ntTSL 3 BASIC15.8■□□□□ 0.12
CCNKO75909 SAPCD2P1-201ENST00000395413 1184 ntBASIC15.8■□□□□ 0.12
CCNKO75909 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC15.8■□□□□ 0.12
CCNKO75909 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC15.8■□□□□ 0.12
CCNKO75909 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC15.8■□□□□ 0.12
CCNKO75909 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC15.8■□□□□ 0.12
CCNKO75909 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC15.8■□□□□ 0.12
CCNKO75909 AC110285.6-201ENST00000617652 491 ntBASIC15.8■□□□□ 0.12
CCNKO75909 NME4-211ENST00000620944 1193 ntTSL 2 BASIC15.8■□□□□ 0.12
CCNKO75909 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCNKO75909 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCNKO75909 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCNKO75909 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms