Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.011e-7■■□□□ 12.3
DROSHAQ9NRR4 MIR636-201ENST00000384825 99 ntBASIC14.99□□□□□ -0.011e-7■■□□□ 12.3
DROSHAQ9NRR4 EIF3K-212ENST00000593062 704 ntTSL 214.95□□□□□ -0.021e-7■■□□□ 12.3
DROSHAQ9NRR4 EIF3K-211ENST00000592558 670 ntTSL 2 BASIC14.95□□□□□ -0.021e-7■■□□□ 12.3
DROSHAQ9NRR4 DEF8-201ENST00000268676 3725 ntTSL 2 BASIC14.7□□□□□ -0.061e-7■■□□□ 12.3
DROSHAQ9NRR4 GLRX5-202ENST00000553672 912 ntTSL 212.61□□□□□ -0.391e-7■■□□□ 12.3
DROSHAQ9NRR4 PRDM10-207ENST00000528746 6182 ntTSL 5 BASIC11.37□□□□□ -0.591e-7■■□□□ 12.3
DROSHAQ9NRR4 PRDM10-208ENST00000531431 528 ntTSL 48.11□□□□□ -1.111e-7■■□□□ 12.3
DROSHAQ9NRR4 SPC25-202ENST00000451987 596 ntTSL 35.05□□□□□ -1.61e-7■■□□□ 12.3
DROSHAQ9NRR4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.942e-7■■□□□ 12.3
DROSHAQ9NRR4 COPB1-209ENST00000533096 547 ntTSL 420.83■□□□□ 0.925e-32■■□□□ 12.3
DROSHAQ9NRR4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.452e-7■■□□□ 12.3
DROSHAQ9NRR4 PRSS21-209ENST00000575739 378 ntTSL 314.49□□□□□ -0.092e-7■■□□□ 12.3
DROSHAQ9NRR4 RPL23A-209ENST00000582736 595 ntTSL 1 (best)24.04■■□□□ 1.441e-45■■□□□ 12.3
DROSHAQ9NRR4 SNORD42B-201ENST00000458893 67 ntBASIC-1.46□□□□□ -2.641e-45■■□□□ 12.3
DROSHAQ9NRR4 RBBP7-209ENST00000468092 630 ntTSL 527.35■■□□□ 1.972e-11■■□□□ 12.3
DROSHAQ9NRR4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.82e-11■■□□□ 12.3
DROSHAQ9NRR4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC25.21■■□□□ 1.632e-11■■□□□ 12.3
DROSHAQ9NRR4 KMT5C-205ENST00000464185 2235 ntTSL 1 (best)25.11■■□□□ 1.611e-7■■□□□ 12.3
DROSHAQ9NRR4 CYBA-206ENST00000566229 405 ntTSL 321.75■■□□□ 1.074e-7■■□□□ 12.3
DROSHAQ9NRR4 MSH6-203ENST00000420813 491 ntTSL 427.13■■□□□ 1.934e-9■■□□□ 12.3
DROSHAQ9NRR4 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC10□□□□□ -0.814e-9■■□□□ 12.3
DROSHAQ9NRR4 ZFX-207ENST00000459724 673 ntTSL 535.7■■■■□ 3.313e-6■■□□□ 12.2
DROSHAQ9NRR4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC28.46■■■□□ 2.153e-6■■□□□ 12.2
DROSHAQ9NRR4 ZFX-210ENST00000497813 475 ntTSL 525.36■■□□□ 1.653e-6■■□□□ 12.2
DROSHAQ9NRR4 ZFX-205ENST00000419690 300 ntTSL 220.37■□□□□ 0.853e-6■■□□□ 12.2
DROSHAQ9NRR4 ZFX-206ENST00000428571 600 ntTSL 219.95■□□□□ 0.783e-6■■□□□ 12.2
DROSHAQ9NRR4 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.723e-6■■□□□ 12.2
DROSHAQ9NRR4 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC9.48□□□□□ -0.893e-6■■□□□ 12.2
DROSHAQ9NRR4 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.76□□□□□ -1.333e-6■■□□□ 12.2
DROSHAQ9NRR4 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.463e-6■■□□□ 12.2
DROSHAQ9NRR4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.791e-7■■□□□ 12.2
DROSHAQ9NRR4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC32.46■■■□□ 2.791e-7■■□□□ 12.2
DROSHAQ9NRR4 TPM3-202ENST00000302206 741 ntTSL 3 BASIC18.11■□□□□ 0.491e-7■■□□□ 12.2
DROSHAQ9NRR4 ANTXR2-201ENST00000307333 1473 ntTSL 1 (best) BASIC14.6□□□□□ -0.071e-7■■□□□ 12.2
DROSHAQ9NRR4 TPM3-218ENST00000505010 540 ntTSL 214.13□□□□□ -0.151e-7■■□□□ 12.2
DROSHAQ9NRR4 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.181e-7■■□□□ 12.2
DROSHAQ9NRR4 TPM3-203ENST00000312970 750 ntTSL 512.69□□□□□ -0.381e-7■■□□□ 12.2
DROSHAQ9NRR4 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC11.65□□□□□ -0.541e-7■■□□□ 12.2
DROSHAQ9NRR4 ANTXR2-208ENST00000506286 773 ntTSL 39.8□□□□□ -0.841e-7■■□□□ 12.2
DROSHAQ9NRR4 ANTXR2-209ENST00000514959 579 ntTSL 22.84□□□□□ -1.961e-7■■□□□ 12.2
DROSHAQ9NRR4 ANP32A-208ENST00000495420 707 ntTSL 227.31■■□□□ 1.964e-6■■□□□ 12.2
DROSHAQ9NRR4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.364e-6■■□□□ 12.2
DROSHAQ9NRR4 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.154e-6■■□□□ 12.2
DROSHAQ9NRR4 ANP32A-202ENST00000409628 2001 ntTSL 519.02■□□□□ 0.634e-6■■□□□ 12.2
DROSHAQ9NRR4 NR2F6-202ENST00000596878 731 ntTSL 338.5■■■■□ 3.752e-7■■□□□ 12.2
DROSHAQ9NRR4 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC46.59■■■■■ 5.055e-7■■□□□ 12.2
DROSHAQ9NRR4 UBE2M-203ENST00000595957 734 ntTSL 222.38■■□□□ 1.175e-7■■□□□ 12.2
DROSHAQ9NRR4 TAL1-204ENST00000464796 237 ntTSL 1 (best)13.81□□□□□ -0.21e-6■■□□□ 12.2
DROSHAQ9NRR4 TANGO2-224ENST00000485715 617 ntTSL 521.03■□□□□ 0.963e-7■■□□□ 12.2
DROSHAQ9NRR4 PTP4A2-214ENST00000532289 610 ntTSL 332.2■■■□□ 2.751e-9■■□□□ 12.2
DROSHAQ9NRR4 PTP4A2-215ENST00000533408 376 ntTSL 332.19■■■□□ 2.741e-9■■□□□ 12.2
DROSHAQ9NRR4 PTP4A2-211ENST00000528840 456 ntTSL 218■□□□□ 0.471e-9■■□□□ 12.2
DROSHAQ9NRR4 PTP4A2-216ENST00000534796 900 ntTSL 316.64■□□□□ 0.251e-9■■□□□ 12.2
DROSHAQ9NRR4 PTP4A2-204ENST00000475464 366 ntTSL 316.23■□□□□ 0.191e-9■■□□□ 12.2
DROSHAQ9NRR4 PTP4A2-208ENST00000524384 663 ntTSL 513.66□□□□□ -0.221e-9■■□□□ 12.2
DROSHAQ9NRR4 PTP4A2-207ENST00000494444 678 ntTSL 55.94□□□□□ -1.461e-9■■□□□ 12.2
DROSHAQ9NRR4 NEU4-215ENST00000488997 541 ntTSL 433.58■■■□□ 2.972e-8■■□□□ 12.2
DROSHAQ9NRR4 NEU4-212ENST00000435894 484 ntTSL 432.8■■■□□ 2.842e-8■■□□□ 12.2
DROSHAQ9NRR4 NEU4-207ENST00000420288 845 ntTSL 329.62■■■□□ 2.332e-8■■□□□ 12.2
DROSHAQ9NRR4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC29.4■■■□□ 2.32e-8■■□□□ 12.2
DROSHAQ9NRR4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.092e-8■■□□□ 12.2
DROSHAQ9NRR4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC26.47■■□□□ 1.832e-8■■□□□ 12.2
DROSHAQ9NRR4 NEU4-209ENST00000426032 676 ntTSL 326.41■■□□□ 1.822e-8■■□□□ 12.2
DROSHAQ9NRR4 PTPN12-216ENST00000523952 500 ntTSL 415.11■□□□□ 0.011e-7■■□□□ 12.2
DROSHAQ9NRR4 PTPN12-209ENST00000460731 582 ntTSL 28.7□□□□□ -1.021e-7■■□□□ 12.2
DROSHAQ9NRR4 ACTB-211ENST00000480301 657 ntTSL 1 (best)32.14■■■□□ 2.744e-28■■□□□ 12.2
DROSHAQ9NRR4 ACTB-212ENST00000484841 1032 ntTSL 531.3■■■□□ 2.64e-28■■□□□ 12.2
DROSHAQ9NRR4 ACTB-210ENST00000477812 820 ntTSL 230.66■■■□□ 2.54e-28■■□□□ 12.2
DROSHAQ9NRR4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.864e-28■■□□□ 12.2
DROSHAQ9NRR4 ACTB-205ENST00000432588 568 ntTSL 425.31■■□□□ 1.644e-28■■□□□ 12.2
DROSHAQ9NRR4 ACTB-207ENST00000462494 2245 ntTSL 524.39■■□□□ 1.54e-28■■□□□ 12.2
DROSHAQ9NRR4 ACTB-202ENST00000414620 561 ntTSL 424.19■■□□□ 1.464e-28■■□□□ 12.2
DROSHAQ9NRR4 ACTB-206ENST00000443528 569 ntTSL 424.13■■□□□ 1.454e-28■■□□□ 12.2
DROSHAQ9NRR4 ACTB-204ENST00000425660 1845 ntTSL 1 (best)23■■□□□ 1.274e-28■■□□□ 12.2
DROSHAQ9NRR4 ACTB-209ENST00000473257 556 ntTSL 317.84■□□□□ 0.454e-28■■□□□ 12.2
DROSHAQ9NRR4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.711e-8■■□□□ 12.2
DROSHAQ9NRR4 SLC22A31-205ENST00000603735 791 ntTSL 326.47■■□□□ 1.837e-10■■□□□ 12.2
DROSHAQ9NRR4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC26.96■■□□□ 1.911e-8■■□□□ 12.2
DROSHAQ9NRR4 TRIB3-203ENST00000449710 1070 ntTSL 526.56■■□□□ 1.841e-8■■□□□ 12.2
DROSHAQ9NRR4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.353e-9■■□□□ 12.2
DROSHAQ9NRR4 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC39.96■■■■□ 3.996e-8■■□□□ 12.2
DROSHAQ9NRR4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.076e-8■■□□□ 12.2
DROSHAQ9NRR4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC33.11■■■□□ 2.896e-8■■□□□ 12.2
DROSHAQ9NRR4 MBOAT7-206ENST00000437868 2033 ntTSL 1 (best)26.77■■□□□ 1.886e-8■■□□□ 12.2
DROSHAQ9NRR4 PPP6R2-207ENST00000470046 1211 ntTSL 228.45■■■□□ 2.141e-6■■□□□ 12.2
DROSHAQ9NRR4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC40.27■■■■■ 4.044e-47■■□□□ 12.2
DROSHAQ9NRR4 MAPK8-210ENST00000432379 907 ntTSL 327.32■■□□□ 1.962e-6■■□□□ 12.2
DROSHAQ9NRR4 MAPK8-209ENST00000429041 603 ntTSL 516.96■□□□□ 0.312e-6■■□□□ 12.2
DROSHAQ9NRR4 MAPK8-207ENST00000395611 5844 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.232e-6■■□□□ 12.2
DROSHAQ9NRR4 MAPK8-206ENST00000374189 5796 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.452e-6■■□□□ 12.2
DROSHAQ9NRR4 SLC2A1-202ENST00000415851 578 ntTSL 228.31■■■□□ 2.123e-7■■□□□ 12.2
DROSHAQ9NRR4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC27.45■■□□□ 1.983e-7■■□□□ 12.2
DROSHAQ9NRR4 SLC2A1-206ENST00000625233 1031 ntTSL 227.45■■□□□ 1.983e-7■■□□□ 12.2
DROSHAQ9NRR4 SLC2A1-201ENST00000372500 533 ntTSL 324.65■■□□□ 1.543e-7■■□□□ 12.2
DROSHAQ9NRR4 SLC2A1-209ENST00000630821 591 ntTSL 222.63■■□□□ 1.213e-7■■□□□ 12.2
DROSHAQ9NRR4 SLC2A1-208ENST00000630287 2398 ntTSL 522.25■■□□□ 1.153e-7■■□□□ 12.2
DROSHAQ9NRR4 SLC2A1-203ENST00000426263 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.153e-7■■□□□ 12.2
DROSHAQ9NRR4 SPHK1-206ENST00000590379 588 ntTSL 332.11■■■□□ 2.733e-8■■□□□ 12.1
DROSHAQ9NRR4 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.79e-14■■□□□ 12.1
Retrieved 100 of 16,331 protein–RNA pairs in 73.8 ms