Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRDM9Q9NQV7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRDM9Q9NQV7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PRDM9Q9NQV7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.24■□□□□ 0.35
PRDM9Q9NQV7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 AL024508.2-201ENST00000607749 1894 ntBASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 FAM86EP-206ENST00000510506 987 ntBASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.23■□□□□ 0.35
PRDM9Q9NQV7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRDM9Q9NQV7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
PRDM9Q9NQV7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRDM9Q9NQV7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
PRDM9Q9NQV7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRDM9Q9NQV7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRDM9Q9NQV7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRDM9Q9NQV7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRDM9Q9NQV7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.22■□□□□ 0.35
PRDM9Q9NQV7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRDM9Q9NQV7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRDM9Q9NQV7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.22■□□□□ 0.35
PRDM9Q9NQV7 SLC25A6P5-201ENST00000435663 894 ntBASIC17.22■□□□□ 0.35
PRDM9Q9NQV7 SPDYE13P-201ENST00000445314 798 ntBASIC17.22■□□□□ 0.35
PRDM9Q9NQV7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.22■□□□□ 0.35
PRDM9Q9NQV7 AC113404.2-201ENST00000507884 177 ntBASIC17.22■□□□□ 0.35
PRDM9Q9NQV7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.22■□□□□ 0.35
PRDM9Q9NQV7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.22■□□□□ 0.35
PRDM9Q9NQV7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.22■□□□□ 0.35
PRDM9Q9NQV7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PRDM9Q9NQV7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRDM9Q9NQV7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRDM9Q9NQV7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.22■□□□□ 0.35
PRDM9Q9NQV7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PRDM9Q9NQV7 AC104581.1-202ENST00000635932 2618 ntBASIC17.22■□□□□ 0.35
PRDM9Q9NQV7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRDM9Q9NQV7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRDM9Q9NQV7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRDM9Q9NQV7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
PRDM9Q9NQV7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRDM9Q9NQV7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRDM9Q9NQV7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRDM9Q9NQV7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.22■□□□□ 0.35
PRDM9Q9NQV7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.21■□□□□ 0.35
PRDM9Q9NQV7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRDM9Q9NQV7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.21■□□□□ 0.35
PRDM9Q9NQV7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRDM9Q9NQV7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRDM9Q9NQV7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.21■□□□□ 0.35
PRDM9Q9NQV7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.21■□□□□ 0.35
PRDM9Q9NQV7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRDM9Q9NQV7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRDM9Q9NQV7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRDM9Q9NQV7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PRDM9Q9NQV7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRDM9Q9NQV7 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.21■□□□□ 0.35
PRDM9Q9NQV7 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.21■□□□□ 0.35
PRDM9Q9NQV7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.21■□□□□ 0.35
PRDM9Q9NQV7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PRDM9Q9NQV7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRDM9Q9NQV7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRDM9Q9NQV7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.21■□□□□ 0.35
PRDM9Q9NQV7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PRDM9Q9NQV7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PRDM9Q9NQV7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.21■□□□□ 0.35
PRDM9Q9NQV7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRDM9Q9NQV7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms