Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDH17Q12864 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.45■□□□□ 0.54
CDH17Q12864 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.45■□□□□ 0.54
CDH17Q12864 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDH17Q12864 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH17Q12864 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH17Q12864 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH17Q12864 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH17Q12864 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH17Q12864 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH17Q12864 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
CDH17Q12864 AC087499.1-201ENST00000418141 1075 ntBASIC18.45■□□□□ 0.54
CDH17Q12864 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH17Q12864 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.45■□□□□ 0.54
CDH17Q12864 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH17Q12864 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.45■□□□□ 0.54
CDH17Q12864 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.45■□□□□ 0.54
CDH17Q12864 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH17Q12864 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDH17Q12864 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.45■□□□□ 0.54
CDH17Q12864 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDH17Q12864 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.45■□□□□ 0.54
CDH17Q12864 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.45■□□□□ 0.54
CDH17Q12864 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.45■□□□□ 0.54
CDH17Q12864 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CDH17Q12864 AC092865.7-201ENST00000641832 219 ntBASIC18.45■□□□□ 0.54
CDH17Q12864 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.45■□□□□ 0.54
CDH17Q12864 AL024508.2-201ENST00000607749 1894 ntBASIC18.45■□□□□ 0.54
CDH17Q12864 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
CDH17Q12864 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.45■□□□□ 0.54
CDH17Q12864 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH17Q12864 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH17Q12864 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH17Q12864 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH17Q12864 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CDH17Q12864 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH17Q12864 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.44■□□□□ 0.54
CDH17Q12864 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH17Q12864 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH17Q12864 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH17Q12864 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDH17Q12864 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.44■□□□□ 0.54
CDH17Q12864 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDH17Q12864 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH17Q12864 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.44■□□□□ 0.54
CDH17Q12864 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDH17Q12864 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.44■□□□□ 0.54
CDH17Q12864 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.44■□□□□ 0.54
CDH17Q12864 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH17Q12864 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.44■□□□□ 0.54
CDH17Q12864 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.44■□□□□ 0.54
CDH17Q12864 MIR3917-201ENST00000580971 93 ntBASIC18.44■□□□□ 0.54
CDH17Q12864 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH17Q12864 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CDH17Q12864 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH17Q12864 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH17Q12864 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH17Q12864 AC093010.1-201ENST00000473625 1624 ntBASIC18.44■□□□□ 0.54
CDH17Q12864 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CDH17Q12864 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
CDH17Q12864 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH17Q12864 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CDH17Q12864 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH17Q12864 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDH17Q12864 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH17Q12864 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH17Q12864 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH17Q12864 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH17Q12864 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH17Q12864 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDH17Q12864 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.43■□□□□ 0.54
CDH17Q12864 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH17Q12864 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH17Q12864 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.43■□□□□ 0.54
CDH17Q12864 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.43■□□□□ 0.54
CDH17Q12864 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CDH17Q12864 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.43■□□□□ 0.54
CDH17Q12864 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH17Q12864 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH17Q12864 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CDH17Q12864 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.43■□□□□ 0.54
CDH17Q12864 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.43■□□□□ 0.54
CDH17Q12864 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.43■□□□□ 0.54
CDH17Q12864 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.43■□□□□ 0.54
CDH17Q12864 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.43■□□□□ 0.54
CDH17Q12864 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
CDH17Q12864 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.43■□□□□ 0.54
CDH17Q12864 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH17Q12864 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDH17Q12864 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.43■□□□□ 0.54
CDH17Q12864 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.43■□□□□ 0.54
CDH17Q12864 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH17Q12864 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH17Q12864 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH17Q12864 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CDH17Q12864 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH17Q12864 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH17Q12864 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDH17Q12864 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH17Q12864 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms