Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERVFC1P60507 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERVFC1P60507 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.17■□□□□ 0.66
ERVFC1P60507 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ERVFC1P60507 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ERVFC1P60507 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ERVFC1P60507 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.16■□□□□ 0.66
ERVFC1P60507 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ERVFC1P60507 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ERVFC1P60507 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ERVFC1P60507 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.16■□□□□ 0.66
ERVFC1P60507 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ERVFC1P60507 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ERVFC1P60507 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ERVFC1P60507 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.16■□□□□ 0.66
ERVFC1P60507 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.16■□□□□ 0.66
ERVFC1P60507 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.16■□□□□ 0.66
ERVFC1P60507 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.16■□□□□ 0.66
ERVFC1P60507 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ERVFC1P60507 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ERVFC1P60507 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.15■□□□□ 0.66
ERVFC1P60507 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERVFC1P60507 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ERVFC1P60507 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERVFC1P60507 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.15■□□□□ 0.66
ERVFC1P60507 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.15■□□□□ 0.66
ERVFC1P60507 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERVFC1P60507 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERVFC1P60507 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ERVFC1P60507 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERVFC1P60507 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.15■□□□□ 0.66
ERVFC1P60507 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERVFC1P60507 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.15■□□□□ 0.66
ERVFC1P60507 UPF3AP3-201ENST00000420996 769 ntBASIC19.15■□□□□ 0.66
ERVFC1P60507 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.15■□□□□ 0.66
ERVFC1P60507 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.15■□□□□ 0.66
ERVFC1P60507 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.15■□□□□ 0.66
ERVFC1P60507 NKAPP1-205ENST00000585790 367 ntBASIC19.15■□□□□ 0.66
ERVFC1P60507 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.15■□□□□ 0.66
ERVFC1P60507 Z83851.2-201ENST00000609564 659 ntBASIC19.15■□□□□ 0.66
ERVFC1P60507 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.15■□□□□ 0.66
ERVFC1P60507 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERVFC1P60507 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERVFC1P60507 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERVFC1P60507 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.15■□□□□ 0.66
ERVFC1P60507 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERVFC1P60507 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
ERVFC1P60507 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERVFC1P60507 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERVFC1P60507 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.14■□□□□ 0.65
ERVFC1P60507 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERVFC1P60507 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.14■□□□□ 0.65
ERVFC1P60507 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.14■□□□□ 0.65
ERVFC1P60507 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERVFC1P60507 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ERVFC1P60507 KRT18P65-201ENST00000439811 1286 ntBASIC19.14■□□□□ 0.65
ERVFC1P60507 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.14■□□□□ 0.65
ERVFC1P60507 KRT18P3-201ENST00000451602 1288 ntBASIC19.14■□□□□ 0.65
ERVFC1P60507 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
ERVFC1P60507 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERVFC1P60507 AC010327.4-202ENST00000591484 748 ntBASIC19.14■□□□□ 0.65
ERVFC1P60507 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ERVFC1P60507 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
ERVFC1P60507 AC008735.5-201ENST00000623544 497 ntBASIC19.14■□□□□ 0.65
ERVFC1P60507 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.14■□□□□ 0.65
ERVFC1P60507 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERVFC1P60507 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.14■□□□□ 0.65
ERVFC1P60507 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERVFC1P60507 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.14■□□□□ 0.65
ERVFC1P60507 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ERVFC1P60507 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERVFC1P60507 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERVFC1P60507 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERVFC1P60507 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERVFC1P60507 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.14■□□□□ 0.65
ERVFC1P60507 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERVFC1P60507 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.14■□□□□ 0.65
ERVFC1P60507 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.13■□□□□ 0.65
ERVFC1P60507 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
ERVFC1P60507 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ERVFC1P60507 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERVFC1P60507 RPSAP43-201ENST00000402237 625 ntBASIC19.13■□□□□ 0.65
ERVFC1P60507 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.13■□□□□ 0.65
ERVFC1P60507 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.13■□□□□ 0.65
ERVFC1P60507 AL591424.1-201ENST00000442569 1213 ntBASIC19.13■□□□□ 0.65
ERVFC1P60507 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.13■□□□□ 0.65
ERVFC1P60507 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.13■□□□□ 0.65
ERVFC1P60507 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.13■□□□□ 0.65
ERVFC1P60507 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.13■□□□□ 0.65
ERVFC1P60507 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.13■□□□□ 0.65
ERVFC1P60507 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.13■□□□□ 0.65
ERVFC1P60507 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.13■□□□□ 0.65
ERVFC1P60507 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.13■□□□□ 0.65
ERVFC1P60507 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.13■□□□□ 0.65
ERVFC1P60507 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERVFC1P60507 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.13■□□□□ 0.65
ERVFC1P60507 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERVFC1P60507 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
ERVFC1P60507 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.13■□□□□ 0.65
ERVFC1P60507 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms