Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN2DP55273 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CDKN2DP55273 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CDKN2DP55273 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.04■□□□□ 0.48
CDKN2DP55273 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN2DP55273 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN2DP55273 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN2DP55273 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN2DP55273 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.04■□□□□ 0.48
CDKN2DP55273 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CDKN2DP55273 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN2DP55273 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CDKN2DP55273 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.04■□□□□ 0.48
CDKN2DP55273 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.04■□□□□ 0.48
CDKN2DP55273 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.04■□□□□ 0.48
CDKN2DP55273 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
CDKN2DP55273 AC087499.1-201ENST00000418141 1075 ntBASIC18.04■□□□□ 0.48
CDKN2DP55273 ECEL1P3-201ENST00000427961 737 ntBASIC18.04■□□□□ 0.48
CDKN2DP55273 SLC25A6P5-201ENST00000435663 894 ntBASIC18.04■□□□□ 0.48
CDKN2DP55273 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.04■□□□□ 0.48
CDKN2DP55273 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN2DP55273 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.04■□□□□ 0.48
CDKN2DP55273 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.04■□□□□ 0.48
CDKN2DP55273 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.04■□□□□ 0.48
CDKN2DP55273 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.04■□□□□ 0.48
CDKN2DP55273 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.04■□□□□ 0.48
CDKN2DP55273 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN2DP55273 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN2DP55273 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN2DP55273 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN2DP55273 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN2DP55273 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.03■□□□□ 0.48
CDKN2DP55273 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN2DP55273 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.03■□□□□ 0.48
CDKN2DP55273 KRT18P22-201ENST00000402024 1347 ntBASIC18.03■□□□□ 0.48
CDKN2DP55273 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN2DP55273 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN2DP55273 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CDKN2DP55273 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN2DP55273 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.03■□□□□ 0.48
CDKN2DP55273 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN2DP55273 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.03■□□□□ 0.48
CDKN2DP55273 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.03■□□□□ 0.48
CDKN2DP55273 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN2DP55273 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN2DP55273 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.03■□□□□ 0.48
CDKN2DP55273 AL512604.3-201ENST00000569583 964 ntBASIC18.03■□□□□ 0.48
CDKN2DP55273 NEK4P2-201ENST00000580004 1012 ntBASIC18.03■□□□□ 0.48
CDKN2DP55273 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.03■□□□□ 0.48
CDKN2DP55273 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CDKN2DP55273 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.03■□□□□ 0.48
CDKN2DP55273 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN2DP55273 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
CDKN2DP55273 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.03■□□□□ 0.48
CDKN2DP55273 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN2DP55273 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN2DP55273 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.03■□□□□ 0.48
CDKN2DP55273 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN2DP55273 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN2DP55273 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.03■□□□□ 0.48
CDKN2DP55273 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN2DP55273 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN2DP55273 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN2DP55273 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDKN2DP55273 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDKN2DP55273 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDKN2DP55273 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
CDKN2DP55273 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDKN2DP55273 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CDKN2DP55273 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.02■□□□□ 0.48
CDKN2DP55273 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDKN2DP55273 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDKN2DP55273 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.02■□□□□ 0.48
CDKN2DP55273 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
CDKN2DP55273 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.02■□□□□ 0.48
CDKN2DP55273 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.02■□□□□ 0.48
CDKN2DP55273 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.02■□□□□ 0.48
CDKN2DP55273 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.02■□□□□ 0.48
CDKN2DP55273 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.02■□□□□ 0.48
CDKN2DP55273 AC145285.6-201ENST00000604632 637 ntBASIC18.02■□□□□ 0.48
CDKN2DP55273 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDKN2DP55273 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.02■□□□□ 0.48
CDKN2DP55273 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDKN2DP55273 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDKN2DP55273 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
CDKN2DP55273 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.02■□□□□ 0.47
CDKN2DP55273 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CDKN2DP55273 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDKN2DP55273 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDKN2DP55273 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDKN2DP55273 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.02■□□□□ 0.47
CDKN2DP55273 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.02■□□□□ 0.47
CDKN2DP55273 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDKN2DP55273 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDKN2DP55273 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.02■□□□□ 0.47
CDKN2DP55273 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDKN2DP55273 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDKN2DP55273 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDKN2DP55273 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.01■□□□□ 0.47
CDKN2DP55273 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms