Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC25A1P53007 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC25A1P53007 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC25A1P53007 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SLC25A1P53007 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC25A1P53007 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC25A1P53007 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC25A1P53007 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC25A1P53007 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC25A1P53007 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC25A1P53007 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC25A1P53007 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC25A1P53007 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SLC25A1P53007 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC25A1P53007 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.22■□□□□ 0.19
SLC25A1P53007 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC25A1P53007 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC25A1P53007 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.22■□□□□ 0.19
SLC25A1P53007 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC25A1P53007 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC25A1P53007 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.22■□□□□ 0.19
SLC25A1P53007 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.22■□□□□ 0.19
SLC25A1P53007 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.22■□□□□ 0.19
SLC25A1P53007 MIR4785-201ENST00000585005 73 ntBASIC16.22■□□□□ 0.19
SLC25A1P53007 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC25A1P53007 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC25A1P53007 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC25A1P53007 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC25A1P53007 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC25A1P53007 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC25A1P53007 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC25A1P53007 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SLC25A1P53007 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
SLC25A1P53007 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SLC25A1P53007 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC25A1P53007 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC25A1P53007 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC25A1P53007 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC25A1P53007 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC25A1P53007 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC25A1P53007 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC25A1P53007 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC25A1P53007 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC25A1P53007 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC25A1P53007 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC25A1P53007 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC25A1P53007 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC25A1P53007 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
SLC25A1P53007 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC25A1P53007 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC25A1P53007 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC25A1P53007 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC25A1P53007 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SLC25A1P53007 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
SLC25A1P53007 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.21■□□□□ 0.19
SLC25A1P53007 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.21■□□□□ 0.19
SLC25A1P53007 AC007663.1-201ENST00000438948 1240 ntBASIC16.21■□□□□ 0.19
SLC25A1P53007 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC25A1P53007 DUTP2-201ENST00000519164 463 ntBASIC16.21■□□□□ 0.19
SLC25A1P53007 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.21■□□□□ 0.19
SLC25A1P53007 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.21■□□□□ 0.19
SLC25A1P53007 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.21■□□□□ 0.19
SLC25A1P53007 AC010653.2-201ENST00000623505 997 ntBASIC16.21■□□□□ 0.19
SLC25A1P53007 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC25A1P53007 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SLC25A1P53007 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC25A1P53007 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC25A1P53007 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC25A1P53007 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC25A1P53007 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC25A1P53007 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC25A1P53007 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
SLC25A1P53007 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC25A1P53007 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.21■□□□□ 0.18
SLC25A1P53007 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC25A1P53007 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC25A1P53007 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC25A1P53007 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC25A1P53007 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC25A1P53007 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
SLC25A1P53007 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.2■□□□□ 0.18
SLC25A1P53007 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC25A1P53007 MIR718-201ENST00000390190 70 ntBASIC16.2■□□□□ 0.18
SLC25A1P53007 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC25A1P53007 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.2■□□□□ 0.18
SLC25A1P53007 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC25A1P53007 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC25A1P53007 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC25A1P53007 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.2■□□□□ 0.18
SLC25A1P53007 AP000525.1-201ENST00000608286 694 ntBASIC16.2■□□□□ 0.18
SLC25A1P53007 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SLC25A1P53007 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SLC25A1P53007 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC25A1P53007 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
SLC25A1P53007 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
SLC25A1P53007 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SLC25A1P53007 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SLC25A1P53007 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC25A1P53007 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC25A1P53007 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms