Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC22.43■■□□□ 1.18
PDE6BP35913 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDE6BP35913 AL032819.2-201ENST00000624543 2162 ntBASIC22.42■■□□□ 1.18
PDE6BP35913 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC22.42■■□□□ 1.18
PDE6BP35913 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PDE6BP35913 AC009947.1-201ENST00000444350 727 ntBASIC22.42■■□□□ 1.18
PDE6BP35913 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC22.42■■□□□ 1.18
PDE6BP35913 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC22.42■■□□□ 1.18
PDE6BP35913 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC22.42■■□□□ 1.18
PDE6BP35913 MTDHP5-201ENST00000598980 586 ntBASIC22.42■■□□□ 1.18
PDE6BP35913 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PDE6BP35913 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
PDE6BP35913 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
PDE6BP35913 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
PDE6BP35913 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22.42■■□□□ 1.18
PDE6BP35913 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PDE6BP35913 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PDE6BP35913 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PDE6BP35913 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC22.41■■□□□ 1.18
PDE6BP35913 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PDE6BP35913 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
PDE6BP35913 AC022898.2-201ENST00000616822 1312 ntBASIC22.41■■□□□ 1.18
PDE6BP35913 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC22.41■■□□□ 1.18
PDE6BP35913 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC22.41■■□□□ 1.18
PDE6BP35913 BEX3-201ENST00000361298 921 ntTSL 2 BASIC22.41■■□□□ 1.18
PDE6BP35913 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PDE6BP35913 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC22.41■■□□□ 1.18
PDE6BP35913 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
PDE6BP35913 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PDE6BP35913 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC22.41■■□□□ 1.18
PDE6BP35913 AC112698.1-201ENST00000510299 916 ntBASIC22.41■■□□□ 1.18
PDE6BP35913 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC22.41■■□□□ 1.18
PDE6BP35913 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PDE6BP35913 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PDE6BP35913 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
PDE6BP35913 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
PDE6BP35913 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PDE6BP35913 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC22.41■■□□□ 1.18
PDE6BP35913 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PDE6BP35913 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PDE6BP35913 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.4■■□□□ 1.18
PDE6BP35913 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
PDE6BP35913 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PDE6BP35913 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PDE6BP35913 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC22.4■■□□□ 1.18
PDE6BP35913 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PDE6BP35913 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PDE6BP35913 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC22.4■■□□□ 1.18
PDE6BP35913 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC22.4■■□□□ 1.18
PDE6BP35913 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC22.4■■□□□ 1.18
PDE6BP35913 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC22.4■■□□□ 1.18
PDE6BP35913 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
PDE6BP35913 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PDE6BP35913 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC22.4■■□□□ 1.18
PDE6BP35913 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC22.4■■□□□ 1.18
PDE6BP35913 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC22.4■■□□□ 1.18
PDE6BP35913 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC22.4■■□□□ 1.18
PDE6BP35913 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC22.4■■□□□ 1.18
PDE6BP35913 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PDE6BP35913 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC22.39■■□□□ 1.18
PDE6BP35913 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PDE6BP35913 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
PDE6BP35913 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
PDE6BP35913 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC22.39■■□□□ 1.17
PDE6BP35913 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PDE6BP35913 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
PDE6BP35913 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PDE6BP35913 DNAJB3-202ENST00000449667 1266 ntBASIC22.39■■□□□ 1.17
PDE6BP35913 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC22.39■■□□□ 1.17
PDE6BP35913 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC22.39■■□□□ 1.17
PDE6BP35913 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC22.39■■□□□ 1.17
PDE6BP35913 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC22.39■■□□□ 1.17
PDE6BP35913 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC22.39■■□□□ 1.17
PDE6BP35913 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC22.39■■□□□ 1.17
PDE6BP35913 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PDE6BP35913 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PDE6BP35913 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PDE6BP35913 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
PDE6BP35913 AL158211.5-201ENST00000623583 2518 ntBASIC22.38■■□□□ 1.17
PDE6BP35913 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC22.38■■□□□ 1.17
PDE6BP35913 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PDE6BP35913 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PDE6BP35913 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PDE6BP35913 AC023274.1-201ENST00000418278 595 ntBASIC22.38■■□□□ 1.17
PDE6BP35913 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC22.38■■□□□ 1.17
PDE6BP35913 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC22.38■■□□□ 1.17
PDE6BP35913 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC22.38■■□□□ 1.17
PDE6BP35913 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PDE6BP35913 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC22.38■■□□□ 1.17
PDE6BP35913 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC22.38■■□□□ 1.17
PDE6BP35913 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PDE6BP35913 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
PDE6BP35913 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC22.38■■□□□ 1.17
PDE6BP35913 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC22.38■■□□□ 1.17
PDE6BP35913 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC22.38■■□□□ 1.17
PDE6BP35913 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
PDE6BP35913 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
PDE6BP35913 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC22.38■■□□□ 1.17
PDE6BP35913 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC22.38■■□□□ 1.17
PDE6BP35913 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms