Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.71□□□□□ -0.05
TCRBV4S1A1TA0A5B7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TCRBV4S1A1TA0A5B7 NEK4P2-201ENST00000580004 1012 ntBASIC14.71□□□□□ -0.05
TCRBV4S1A1TA0A5B7 AL358472.4-201ENST00000633140 710 ntBASIC14.71□□□□□ -0.05
TCRBV4S1A1TA0A5B7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TCRBV4S1A1TA0A5B7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TCRBV4S1A1TA0A5B7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TCRBV4S1A1TA0A5B7 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC14.71□□□□□ -0.05
TCRBV4S1A1TA0A5B7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TCRBV4S1A1TA0A5B7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC14.71□□□□□ -0.06
TCRBV4S1A1TA0A5B7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
TCRBV4S1A1TA0A5B7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TCRBV4S1A1TA0A5B7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
TCRBV4S1A1TA0A5B7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 UPK3BP1-201ENST00000428678 509 ntBASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 AL671277.2-201ENST00000458060 996 ntBASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
TCRBV4S1A1TA0A5B7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 AC068880.1-201ENST00000507289 2297 ntBASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 PCDHB18P-201ENST00000524813 2368 ntBASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 MYC-208ENST00000641036 567 ntBASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 OR6D1P-202ENST00000641007 5290 ntBASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV4S1A1TA0A5B7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms