Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.86■□□□□ 0.93
PCDHA4Q9UN74 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDHA4Q9UN74 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDHA4Q9UN74 MIR1224-201ENST00000408193 85 ntBASIC20.86■□□□□ 0.93
PCDHA4Q9UN74 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDHA4Q9UN74 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.86■□□□□ 0.93
PCDHA4Q9UN74 AC113404.2-201ENST00000507884 177 ntBASIC20.86■□□□□ 0.93
PCDHA4Q9UN74 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.86■□□□□ 0.93
PCDHA4Q9UN74 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.86■□□□□ 0.93
PCDHA4Q9UN74 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.86■□□□□ 0.93
PCDHA4Q9UN74 AC010331.1-201ENST00000611423 582 ntBASIC20.86■□□□□ 0.93
PCDHA4Q9UN74 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
PCDHA4Q9UN74 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.86■□□□□ 0.93
PCDHA4Q9UN74 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHA4Q9UN74 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHA4Q9UN74 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.86■□□□□ 0.93
PCDHA4Q9UN74 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PCDHA4Q9UN74 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHA4Q9UN74 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHA4Q9UN74 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.86■□□□□ 0.93
PCDHA4Q9UN74 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHA4Q9UN74 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHA4Q9UN74 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHA4Q9UN74 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHA4Q9UN74 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDHA4Q9UN74 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
PCDHA4Q9UN74 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHA4Q9UN74 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHA4Q9UN74 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHA4Q9UN74 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHA4Q9UN74 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHA4Q9UN74 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHA4Q9UN74 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHA4Q9UN74 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHA4Q9UN74 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.85■□□□□ 0.93
PCDHA4Q9UN74 AL136038.3-201ENST00000561909 1096 ntBASIC20.85■□□□□ 0.93
PCDHA4Q9UN74 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHA4Q9UN74 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDHA4Q9UN74 AL121956.5-201ENST00000625261 221 ntBASIC20.85■□□□□ 0.93
PCDHA4Q9UN74 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHA4Q9UN74 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHA4Q9UN74 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHA4Q9UN74 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHA4Q9UN74 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
PCDHA4Q9UN74 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHA4Q9UN74 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHA4Q9UN74 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHA4Q9UN74 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.85■□□□□ 0.93
PCDHA4Q9UN74 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHA4Q9UN74 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHA4Q9UN74 AL390961.4-201ENST00000623958 2535 ntBASIC20.84■□□□□ 0.93
PCDHA4Q9UN74 REXO1L9P-201ENST00000604264 2108 ntBASIC20.84■□□□□ 0.93
PCDHA4Q9UN74 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDHA4Q9UN74 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHA4Q9UN74 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PCDHA4Q9UN74 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHA4Q9UN74 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHA4Q9UN74 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHA4Q9UN74 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHA4Q9UN74 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHA4Q9UN74 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHA4Q9UN74 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHA4Q9UN74 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHA4Q9UN74 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHA4Q9UN74 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHA4Q9UN74 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHA4Q9UN74 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHA4Q9UN74 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHA4Q9UN74 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHA4Q9UN74 KRT18P35-201ENST00000510488 1269 ntBASIC20.84■□□□□ 0.93
PCDHA4Q9UN74 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.84■□□□□ 0.93
PCDHA4Q9UN74 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHA4Q9UN74 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHA4Q9UN74 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHA4Q9UN74 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHA4Q9UN74 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHA4Q9UN74 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHA4Q9UN74 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHA4Q9UN74 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
PCDHA4Q9UN74 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHA4Q9UN74 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHA4Q9UN74 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHA4Q9UN74 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHA4Q9UN74 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHA4Q9UN74 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHA4Q9UN74 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHA4Q9UN74 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
PCDHA4Q9UN74 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.83■□□□□ 0.93
PCDHA4Q9UN74 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHA4Q9UN74 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHA4Q9UN74 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHA4Q9UN74 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHA4Q9UN74 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHA4Q9UN74 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHA4Q9UN74 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHA4Q9UN74 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHA4Q9UN74 RNF165-205ENST00000588679 2904 ntBASIC20.83■□□□□ 0.93
PCDHA4Q9UN74 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHA4Q9UN74 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHA4Q9UN74 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms