Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CD248Q9HCU0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.2■□□□□ 0.66
CD248Q9HCU0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CD248Q9HCU0 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CD248Q9HCU0 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CD248Q9HCU0 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.2■□□□□ 0.66
CD248Q9HCU0 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
CD248Q9HCU0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CD248Q9HCU0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CD248Q9HCU0 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
CD248Q9HCU0 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CD248Q9HCU0 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD248Q9HCU0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD248Q9HCU0 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CD248Q9HCU0 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CD248Q9HCU0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD248Q9HCU0 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD248Q9HCU0 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.19■□□□□ 0.66
CD248Q9HCU0 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.19■□□□□ 0.66
CD248Q9HCU0 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.19■□□□□ 0.66
CD248Q9HCU0 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD248Q9HCU0 SDHAP1-207ENST00000440850 2000 ntBASIC19.19■□□□□ 0.66
CD248Q9HCU0 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CD248Q9HCU0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.19■□□□□ 0.66
CD248Q9HCU0 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD248Q9HCU0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CD248Q9HCU0 SPDYE15P-201ENST00000424157 909 ntBASIC19.19■□□□□ 0.66
CD248Q9HCU0 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CD248Q9HCU0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.19■□□□□ 0.66
CD248Q9HCU0 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.19■□□□□ 0.66
CD248Q9HCU0 KRT18P56-201ENST00000507275 550 ntBASIC19.19■□□□□ 0.66
CD248Q9HCU0 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.19■□□□□ 0.66
CD248Q9HCU0 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD248Q9HCU0 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.19■□□□□ 0.66
CD248Q9HCU0 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.19■□□□□ 0.66
CD248Q9HCU0 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CD248Q9HCU0 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.19■□□□□ 0.66
CD248Q9HCU0 CR769767.2-201ENST00000622735 460 ntBASIC19.19■□□□□ 0.66
CD248Q9HCU0 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.19■□□□□ 0.66
CD248Q9HCU0 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD248Q9HCU0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.19■□□□□ 0.66
CD248Q9HCU0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.19■□□□□ 0.66
CD248Q9HCU0 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD248Q9HCU0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CD248Q9HCU0 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.19■□□□□ 0.66
CD248Q9HCU0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD248Q9HCU0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CD248Q9HCU0 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD248Q9HCU0 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CD248Q9HCU0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CD248Q9HCU0 WIZP1-201ENST00000531444 2299 ntBASIC19.18■□□□□ 0.66
CD248Q9HCU0 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD248Q9HCU0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.18■□□□□ 0.66
CD248Q9HCU0 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.18■□□□□ 0.66
CD248Q9HCU0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD248Q9HCU0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD248Q9HCU0 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD248Q9HCU0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CD248Q9HCU0 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD248Q9HCU0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.18■□□□□ 0.66
CD248Q9HCU0 AC112907.2-201ENST00000448639 330 ntBASIC19.18■□□□□ 0.66
CD248Q9HCU0 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CD248Q9HCU0 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CD248Q9HCU0 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.18■□□□□ 0.66
CD248Q9HCU0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.18■□□□□ 0.66
CD248Q9HCU0 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
CD248Q9HCU0 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.18■□□□□ 0.66
CD248Q9HCU0 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CD248Q9HCU0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD248Q9HCU0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.18■□□□□ 0.66
CD248Q9HCU0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.18■□□□□ 0.66
CD248Q9HCU0 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD248Q9HCU0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD248Q9HCU0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.18■□□□□ 0.66
CD248Q9HCU0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.18■□□□□ 0.66
CD248Q9HCU0 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD248Q9HCU0 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD248Q9HCU0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CD248Q9HCU0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD248Q9HCU0 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CD248Q9HCU0 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CD248Q9HCU0 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD248Q9HCU0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.17■□□□□ 0.66
CD248Q9HCU0 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
CD248Q9HCU0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD248Q9HCU0 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CD248Q9HCU0 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.17■□□□□ 0.66
CD248Q9HCU0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD248Q9HCU0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD248Q9HCU0 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CD248Q9HCU0 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CD248Q9HCU0 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD248Q9HCU0 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.17■□□□□ 0.66
CD248Q9HCU0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CD248Q9HCU0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD248Q9HCU0 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.17■□□□□ 0.66
CD248Q9HCU0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.17■□□□□ 0.66
CD248Q9HCU0 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CD248Q9HCU0 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.17■□□□□ 0.66
CD248Q9HCU0 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms