Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 CABIN1-201ENST00000263119 7222 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.323e-6■□□□□ 10.1
SND1Q7KZF4 CABIN1-203ENST00000398319 7480 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.343e-6■□□□□ 10.1
SND1Q7KZF4 CABIN1-204ENST00000405822 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.413e-6■□□□□ 10.1
SND1Q7KZF4 ATP7B-201ENST00000242839 6638 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.413e-6■□□□□ 10.1
SND1Q7KZF4 CDHR2-203ENST00000506348 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.448e-11■□□□□ 10.1
SND1Q7KZF4 CDHR2-206ENST00000510636 4509 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.468e-11■□□□□ 10.1
SND1Q7KZF4 CABIN1-214ENST00000617531 7072 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.483e-6■□□□□ 10.1
SND1Q7KZF4 ATP7B-213ENST00000634620 5653 ntTSL 1 (best)12□□□□□ -0.493e-6■□□□□ 10.1
SND1Q7KZF4 PRRC2C-204ENST00000426496 10175 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.511e-6■□□□□ 10.1
SND1Q7KZF4 ATP7B-204ENST00000400370 3252 ntTSL 1 (best) BASIC11.24□□□□□ -0.613e-6■□□□□ 10.1
SND1Q7KZF4 CDHR2-201ENST00000261944 4068 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.648e-11■□□□□ 10.1
SND1Q7KZF4 ATP7B-205ENST00000418097 4340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.653e-6■□□□□ 10.1
SND1Q7KZF4 ATP7B-211ENST00000634308 4321 ntTSL 1 (best)10.81□□□□□ -0.683e-6■□□□□ 10.1
SND1Q7KZF4 ATP7B-215ENST00000634844 4398 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.773e-6■□□□□ 10.1
SND1Q7KZF4 ATP7B-206ENST00000448424 6404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.793e-6■□□□□ 10.1
SND1Q7KZF4 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC8.96□□□□□ -0.981e-6■□□□□ 10.1
SND1Q7KZF4 MIR5010-201ENST00000582846 120 ntBASIC7.63□□□□□ -1.193e-6■□□□□ 10.1
SND1Q7KZF4 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.211e-6■□□□□ 10.1
SND1Q7KZF4 PRRC2C-211ENST00000495585 5566 ntTSL 1 (best)5.61□□□□□ -1.511e-6■□□□□ 10.1
SND1Q7KZF4 PSMA3-205ENST00000554207 570 ntTSL 29.23□□□□□ -0.933e-9■□□□□ 10.1
SND1Q7KZF4 GJB1-204ENST00000447581 484 ntTSL 59.35□□□□□ -0.912e-6■□□□□ 10.1
SND1Q7KZF4 SARAF-209ENST00000521934 543 ntTSL 26.11□□□□□ -1.431e-10■□□□□ 10.1
SND1Q7KZF4 SUMF2-219ENST00000531229 737 ntTSL 214.28□□□□□ -0.128e-9■□□□□ 10.1
SND1Q7KZF4 FTH1-207ENST00000532601 742 ntTSL 3 BASIC8.93□□□□□ -0.982e-36■□□□□ 10.1
SND1Q7KZF4 SERINC5-204ENST00000512972 1627 ntTSL 224.77■■□□□ 1.566e-8■□□□□ 10.1
SND1Q7KZF4 SERINC5-206ENST00000632581 1573 ntTSL 224.57■■□□□ 1.526e-8■□□□□ 10.1
SND1Q7KZF4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.17■■□□□ 1.466e-8■□□□□ 10.1
SND1Q7KZF4 SERINC5-202ENST00000507668 6479 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.296e-8■□□□□ 10.1
SND1Q7KZF4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.263e-8■□□□□ 10.1
SND1Q7KZF4 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.58■□□□□ 0.084e-14■□□□□ 10.1
SND1Q7KZF4 VAPA-209ENST00000585042 567 ntTSL 415.52■□□□□ 0.085e-27■□□□□ 10.1
SND1Q7KZF4 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.033e-8■□□□□ 10.1
SND1Q7KZF4 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.054e-14■□□□□ 10.1
SND1Q7KZF4 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC13.18□□□□□ -0.34e-14■□□□□ 10.1
SND1Q7KZF4 TMEM173-203ENST00000502825 570 ntTSL 512.29□□□□□ -0.441e-9■□□□□ 10.1
SND1Q7KZF4 TUSC3-208ENST00000509177 493 ntTSL 211.21□□□□□ -0.613e-8■□□□□ 10.1
SND1Q7KZF4 YWHAE-210ENST00000573026 780 ntTSL 3 BASIC10.93□□□□□ -0.664e-14■□□□□ 10.1
SND1Q7KZF4 YWHAE-211ENST00000573196 739 ntTSL 210.93□□□□□ -0.664e-14■□□□□ 10.1
SND1Q7KZF4 YWHAE-202ENST00000466227 1377 ntTSL 510.21□□□□□ -0.784e-14■□□□□ 10.1
SND1Q7KZF4 MCTS1-201ENST00000371315 1130 ntTSL 2 BASIC10.16□□□□□ -0.783e-8■□□□□ 10.1
SND1Q7KZF4 YWHAE-206ENST00000496706 732 ntTSL 39.78□□□□□ -0.844e-14■□□□□ 10.1
SND1Q7KZF4 SELENOI-202ENST00000442141 504 ntTSL 58.13□□□□□ -1.112e-8■□□□□ 10.1
SND1Q7KZF4 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.263e-8■□□□□ 10.1
SND1Q7KZF4 SERPINB1-203ENST00000468511 449 ntTSL 36.44□□□□□ -1.383e-8■□□□□ 10.1
SND1Q7KZF4 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.453e-8■□□□□ 10.1
SND1Q7KZF4 MCTS1-206ENST00000493274 732 ntTSL 35.27□□□□□ -1.573e-8■□□□□ 10.1
SND1Q7KZF4 MCTS1-205ENST00000487133 766 ntTSL 54.07□□□□□ -1.763e-8■□□□□ 10.1
SND1Q7KZF4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.062e-6■□□□□ 10.1
SND1Q7KZF4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.822e-6■□□□□ 10.1
SND1Q7KZF4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.71e-8■□□□□ 10.1
SND1Q7KZF4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.24■□□□□ 0.671e-8■□□□□ 10.1
SND1Q7KZF4 A2M-205ENST00000472360 692 ntTSL 27.65□□□□□ -1.188e-72■□□□□ 10.1
SND1Q7KZF4 IMPDH2-201ENST00000326739 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.481e-6■□□□□ 10.1
SND1Q7KZF4 ALDOA-205ENST00000562168 666 ntTSL 311.18□□□□□ -0.623e-35■□□□□ 10.1
SND1Q7KZF4 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.057e-8■□□□□ 10
SND1Q7KZF4 TCIRG1-211ENST00000530449 525 ntTSL 1 (best)22.28■■□□□ 1.163e-8■□□□□ 10
SND1Q7KZF4 TSPAN14-201ENST00000265450 2588 ntTSL 218.66■□□□□ 0.583e-8■□□□□ 10
SND1Q7KZF4 TCIRG1-212ENST00000530802 223 ntTSL 1 (best)18.58■□□□□ 0.563e-8■□□□□ 10
SND1Q7KZF4 FRAS1-203ENST00000508900 2169 ntTSL 1 (best)14.24□□□□□ -0.133e-8■□□□□ 10
SND1Q7KZF4 FRAS1-202ENST00000502446 2217 ntTSL 513.86□□□□□ -0.193e-8■□□□□ 10
SND1Q7KZF4 SPTAN1-225ENST00000631121 438 ntTSL 28.03□□□□□ -1.123e-8■□□□□ 10
SND1Q7KZF4 TCIRG1-210ENST00000530063 220 ntTSL 1 (best)4.1□□□□□ -1.753e-8■□□□□ 10
SND1Q7KZF4 CLSTN1-204ENST00000464286 563 ntTSL 27.98□□□□□ -1.132e-7■□□□□ 10
SND1Q7KZF4 ATP5O-208ENST00000491703 2839 ntTSL 215.62■□□□□ 0.094e-33■□□□□ 10
SND1Q7KZF4 ATP5O-205ENST00000431254 583 ntTSL 210.03□□□□□ -0.84e-33■□□□□ 10
SND1Q7KZF4 ATP5O-201ENST00000290299 932 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.824e-33■□□□□ 10
SND1Q7KZF4 AP000311.1-201ENST00000429238 1078 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.834e-33■□□□□ 10
SND1Q7KZF4 ATP5O-203ENST00000418933 415 ntTSL 56.11□□□□□ -1.434e-33■□□□□ 10
SND1Q7KZF4 ATP5O-204ENST00000429064 442 ntTSL 35.91□□□□□ -1.464e-33■□□□□ 10
SND1Q7KZF4 ATP5O-202ENST00000417181 462 ntTSL 35.4□□□□□ -1.544e-33■□□□□ 10
SND1Q7KZF4 CUTA-208ENST00000482684 837 ntTSL 1 (best)21.36■■□□□ 1.011e-6■□□□□ 10
SND1Q7KZF4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.531e-6■□□□□ 10
SND1Q7KZF4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.191e-6■□□□□ 10
SND1Q7KZF4 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.071e-6■□□□□ 10
SND1Q7KZF4 CUTA-201ENST00000374484 658 ntTSL 314.06□□□□□ -0.161e-6■□□□□ 10
SND1Q7KZF4 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC14.06□□□□□ -0.161e-6■□□□□ 10
SND1Q7KZF4 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.271e-6■□□□□ 10
SND1Q7KZF4 CUTA-206ENST00000465956 961 ntTSL 212.21□□□□□ -0.451e-6■□□□□ 10
SND1Q7KZF4 CUTA-209ENST00000487637 1378 ntTSL 211.88□□□□□ -0.511e-6■□□□□ 10
SND1Q7KZF4 CUTA-205ENST00000462802 1054 ntTSL 1 (best)11.33□□□□□ -0.61e-6■□□□□ 10
SND1Q7KZF4 CUTA-211ENST00000488478 676 ntTSL 5 BASIC10.99□□□□□ -0.651e-6■□□□□ 10
SND1Q7KZF4 CUTA-213ENST00000494751 731 ntTSL 5 BASIC10.29□□□□□ -0.761e-6■□□□□ 10
SND1Q7KZF4 CUTA-214ENST00000607266 661 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.841e-6■□□□□ 10
SND1Q7KZF4 CUTA-207ENST00000479249 562 ntTSL 38.1□□□□□ -1.111e-6■□□□□ 10
SND1Q7KZF4 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.544e-14■□□□□ 10
SND1Q7KZF4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.554e-14■□□□□ 10
SND1Q7KZF4 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.03■□□□□ -04e-14■□□□□ 10
SND1Q7KZF4 RAN-204ENST00000464211 562 ntTSL 59.39□□□□□ -0.914e-14■□□□□ 10
SND1Q7KZF4 RAN-211ENST00000541679 572 ntTSL 5 BASIC9.1□□□□□ -0.954e-14■□□□□ 10
SND1Q7KZF4 RAN-201ENST00000392367 780 ntTSL 5 BASIC8.59□□□□□ -1.034e-14■□□□□ 10
SND1Q7KZF4 RAN-203ENST00000448750 2455 ntTSL 27.57□□□□□ -1.24e-14■□□□□ 10
SND1Q7KZF4 MLEC-202ENST00000412616 841 ntTSL 3 BASIC27.11■■□□□ 1.933e-7■□□□□ 10
SND1Q7KZF4 PSMA7-205ENST00000484488 1023 ntTSL 324.35■■□□□ 1.492e-6■□□□□ 10
SND1Q7KZF4 LAMTOR5-205ENST00000531779 569 ntTSL 222.84■■□□□ 1.252e-6■□□□□ 10
SND1Q7KZF4 RNF121-210ENST00000530058 571 ntTSL 420.18■□□□□ 0.822e-6■□□□□ 10
SND1Q7KZF4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.822e-6■□□□□ 10
SND1Q7KZF4 SLC35F5-202ENST00000409106 3120 ntTSL 218.54■□□□□ 0.562e-6■□□□□ 10
SND1Q7KZF4 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.512e-6■□□□□ 10
SND1Q7KZF4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.52e-6■□□□□ 10
SND1Q7KZF4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.492e-6■□□□□ 10
Retrieved 100 of 13,567 protein–RNA pairs in 67.9 ms