RNA–Protein interactions for RNA: ENST00000506348.1

CDHR2-203, Transcript of cadherin related family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDHR2, Length 4,005 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR2-203ENST00000506348 NISCHQ9Y2I1 1504 aa21.14■□□□□ 0.98
CDHR2-203ENST00000506348 SHROOM4Q9ULL8 1493 aa18.64■□□□□ 0.57
CDHR2-203ENST00000506348 SUPT5HO00267 1087 aaKnown RBP18.56■□□□□ 0.56
CDHR2-203ENST00000506348 HRCP23327 699 aa18.11■□□□□ 0.49
CDHR2-203ENST00000506348 DCAF8L2P0C7V8 631 aa18.08■□□□□ 0.49
CDHR2-203ENST00000506348 PCGF6Q9BYE7 350 aa17.99■□□□□ 0.47
CDHR2-203ENST00000506348 CHIC1Q5VXU3 224 aa17.98■□□□□ 0.47
CDHR2-203ENST00000506348 ZCCHC6Q5VYS8 1495 aaKnown RBP17.9■□□□□ 0.46
CDHR2-203ENST00000506348 MYO15BQ96JP2 1530 aa17.77■□□□□ 0.44
CDHR2-203ENST00000506348 CCDC180Q9P1Z9 1646 aa17.69■□□□□ 0.42
CDHR2-203ENST00000506348 PPARGC1BQ86YN6 1023 aaKnown RBP17.65■□□□□ 0.42
CDHR2-203ENST00000506348 DCAF1Q9Y4B6 1507 aa17.55■□□□□ 0.4
CDHR2-203ENST00000506348 LOC105371045A0A1W2PR82 267 aa17.52■□□□□ 0.39
CDHR2-203ENST00000506348 TRIM26Q12899 539 aaPredicted RBP17.51■□□□□ 0.39
CDHR2-203ENST00000506348 ZEB1P37275 1124 aaPredicted RBP17.43■□□□□ 0.38
CDHR2-203ENST00000506348 PELP1Q8IZL8 1130 aaKnown RBP17.29■□□□□ 0.36
CDHR2-203ENST00000506348 TRIM41Q8WV44 630 aa17.25■□□□□ 0.35
CDHR2-203ENST00000506348 FAM9AQ8IZU1 332 aaPredicted RBP17.19■□□□□ 0.34
CDHR2-203ENST00000506348 EHMT2Q96KQ7 1210 aa17.11■□□□□ 0.33
CDHR2-203ENST00000506348 ABCC9O60706 1549 aa16.95■□□□□ 0.3
CDHR2-203ENST00000506348 RSF1Q96T23 1441 aaPredicted RBP16.91■□□□□ 0.3
CDHR2-203ENST00000506348 CCER1Q8TC90 406 aaPredicted RBP16.9■□□□□ 0.3
CDHR2-203ENST00000506348 SCAF1Q9H7N4 1312 aaKnown RBP16.86■□□□□ 0.29
CDHR2-203ENST00000506348 SCRIBQ14160 1630 aa16.84■□□□□ 0.29
CDHR2-203ENST00000506348 CENPBP07199 599 aaPredicted RBP16.82■□□□□ 0.28
CDHR2-203ENST00000506348 RB1CC1Q8TDY2 1594 aa16.76■□□□□ 0.27
CDHR2-203ENST00000506348 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.76■□□□□ 0.27
CDHR2-203ENST00000506348 ACIN1Q9UKV3 1341 aaKnown RBP16.7■□□□□ 0.26
CDHR2-203ENST00000506348 TTBK1Q5TCY1 1321 aaPredicted RBP16.66■□□□□ 0.26
CDHR2-203ENST00000506348 DIEXFQ68CQ4 756 aaKnown RBP16.66■□□□□ 0.26
CDHR2-203ENST00000506348 MYT1Q01538 1121 aa16.62■□□□□ 0.25
CDHR2-203ENST00000506348 NEUROD1Q13562 356 aa16.58■□□□□ 0.24
CDHR2-203ENST00000506348 GTF3C3Q9Y5Q9 886 aa16.57■□□□□ 0.24
CDHR2-203ENST00000506348 CECR2Q9BXF3 1484 aa16.49■□□□□ 0.23
CDHR2-203ENST00000506348 UBTFP17480 764 aaKnown RBP16.48■□□□□ 0.23
CDHR2-203ENST00000506348 MROH2BQ7Z745 1585 aa16.45■□□□□ 0.22
CDHR2-203ENST00000506348 YTHDC1Q96MU7 727 aaKnown RBP16.43■□□□□ 0.22
CDHR2-203ENST00000506348 NACADO15069 1562 aa16.41■□□□□ 0.22
CDHR2-203ENST00000506348 ZNF316A6NFI3 1004 aaPredicted RBP16.41■□□□□ 0.22
CDHR2-203ENST00000506348 APLP2Q06481 763 aa16.36■□□□□ 0.21
CDHR2-203ENST00000506348 CEP162Q5TB80 1403 aa16.35■□□□□ 0.21
CDHR2-203ENST00000506348 WIZO95785 1651 aa16.35■□□□□ 0.21
CDHR2-203ENST00000506348 CSRNP3Q8WYN3 585 aa16.3■□□□□ 0.2
CDHR2-203ENST00000506348 WRNQ14191 1432 aaPredicted RBP eCLIP16.3■□□□□ 0.2
CDHR2-203ENST00000506348 HNRNPUL2Q1KMD3 747 aaKnown RBP16.28■□□□□ 0.2
CDHR2-203ENST00000506348 TNIKQ9UKE5 1360 aa16.28■□□□□ 0.2
CDHR2-203ENST00000506348 BAZ1AQ9NRL2 1556 aaPredicted RBP16.28■□□□□ 0.2
CDHR2-203ENST00000506348 EEA1Q15075 1411 aa16.25■□□□□ 0.19
CDHR2-203ENST00000506348 CCDC88BA6NC98 1476 aa16.21■□□□□ 0.19
CDHR2-203ENST00000506348 ABCC8Q09428 1581 aa16.2■□□□□ 0.18
CDHR2-203ENST00000506348 SOGA1O94964 1423 aa16.17■□□□□ 0.18
CDHR2-203ENST00000506348 GOLGA3Q08378 1498 aa16.16■□□□□ 0.18
CDHR2-203ENST00000506348 TOP2AP11388 1531 aaKnown RBP16.14■□□□□ 0.18
CDHR2-203ENST00000506348 MIER1Q8N108 512 aa16.14■□□□□ 0.17
CDHR2-203ENST00000506348 RANGAP1P46060 587 aaPredicted RBP16.11■□□□□ 0.17
CDHR2-203ENST00000506348 EIF4G1Q04637 1599 aaKnown RBP16.06■□□□□ 0.16
CDHR2-203ENST00000506348 CLIP1P30622 1438 aa16.04■□□□□ 0.16
CDHR2-203ENST00000506348 CEP164Q9UPV0 1460 aa16.02■□□□□ 0.15
CDHR2-203ENST00000506348 SMARCA2P51531 1590 aa16.01■□□□□ 0.15
CDHR2-203ENST00000506348 CLSPNQ9HAW4 1339 aa16.01■□□□□ 0.15
CDHR2-203ENST00000506348 SMARCA4P51532 1647 aa16■□□□□ 0.15
CDHR2-203ENST00000506348 RUSC2Q8N2Y8 1516 aa15.99■□□□□ 0.15
CDHR2-203ENST00000506348 VPS8Q8N3P4 1428 aa15.93■□□□□ 0.14
CDHR2-203ENST00000506348 PABPN1Q86U42 306 aaKnown RBP eCLIP15.88■□□□□ 0.131e-6■□□□□ 11.2
CDHR2-203ENST00000506348 BAZ1BQ9UIG0 1483 aaKnown RBP15.81■□□□□ 0.12
CDHR2-203ENST00000506348 KIF21BO75037 1637 aa15.81■□□□□ 0.12
CDHR2-203ENST00000506348 ITGAEP38570 1179 aa15.79■□□□□ 0.12
CDHR2-203ENST00000506348 SUPT16HQ9Y5B9 1047 aaKnown RBP15.79■□□□□ 0.12
CDHR2-203ENST00000506348 RAPGEF2Q9Y4G8 1499 aa15.75■□□□□ 0.11
CDHR2-203ENST00000506348 NEFLP07196 543 aa15.75■□□□□ 0.11
CDHR2-203ENST00000506348 DHX57Q6P158 1386 aaKnown RBP15.73■□□□□ 0.11
CDHR2-203ENST00000506348 SYNJ1O43426 1573 aa15.71■□□□□ 0.11
CDHR2-203ENST00000506348 BCANQ96GW7 911 aa15.65■□□□□ 0.1
CDHR2-203ENST00000506348 KANK4Q5T7N3 995 aaPredicted RBP15.63■□□□□ 0.09
CDHR2-203ENST00000506348 CCNB3Q8WWL7 1395 aa15.61■□□□□ 0.09
CDHR2-203ENST00000506348 ANP32EQ9BTT0 268 aa15.6■□□□□ 0.09
CDHR2-203ENST00000506348 TSHZ2Q9NRE2 1034 aa15.6■□□□□ 0.09
CDHR2-203ENST00000506348 FKBP8Q14318 412 aa15.58■□□□□ 0.08
CDHR2-203ENST00000506348 ATAD2BQ9ULI0 1458 aa15.57■□□□□ 0.08
CDHR2-203ENST00000506348 ATP1B4Q9UN42 357 aaPredicted RBP15.56■□□□□ 0.08
CDHR2-203ENST00000506348 UNC13AQ9UPW8 1703 aa15.55■□□□□ 0.08
CDHR2-203ENST00000506348 DDX10Q13206 875 aaKnown RBP15.55■□□□□ 0.08
CDHR2-203ENST00000506348 FAM50AQ14320 339 aaKnown RBP15.55■□□□□ 0.08
CDHR2-203ENST00000506348 KIF27Q86VH2 1401 aa15.55■□□□□ 0.08
CDHR2-203ENST00000506348 PEG3Q9GZU2 1588 aa15.55■□□□□ 0.08
CDHR2-203ENST00000506348 ERICH3Q5RHP9 1530 aa15.54■□□□□ 0.08
CDHR2-203ENST00000506348 ANP32CO43423 234 aa15.53■□□□□ 0.08
CDHR2-203ENST00000506348 RRBP1Q9P2E9 1410 aaKnown RBP15.52■□□□□ 0.08
CDHR2-203ENST00000506348 ARAP1Q96P48 1450 aa15.52■□□□□ 0.07
CDHR2-203ENST00000506348 TOP2BQ02880 1626 aa15.5■□□□□ 0.07
CDHR2-203ENST00000506348 RAB3GAP2Q9H2M9 1393 aa15.49■□□□□ 0.07
CDHR2-203ENST00000506348 PRXQ9BXM0 1461 aa15.48■□□□□ 0.07
CDHR2-203ENST00000506348 ERICH6Q7L0X2 663 aa15.47■□□□□ 0.07
CDHR2-203ENST00000506348 KCNH8Q96L42 1107 aa15.45■□□□□ 0.06
CDHR2-203ENST00000506348 SETD5Q9C0A6 1442 aa15.44■□□□□ 0.06
CDHR2-203ENST00000506348 BICRAQ9NZM4 1560 aa15.44■□□□□ 0.06
CDHR2-203ENST00000506348 TRIM52Q96A61 297 aa15.42■□□□□ 0.06
CDHR2-203ENST00000506348 SIN3AQ96ST3 1273 aa15.4■□□□□ 0.06
CDHR2-203ENST00000506348 TIMELESSQ9UNS1 1208 aa15.4■□□□□ 0.06
CDHR2-203ENST00000506348 CUX2O14529 1486 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms