Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC13.17□□□□□ -0.3
CHTOPQ9Y3Y2 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 TFP1-202ENST00000475455 1573 ntBASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 AL356441.2-201ENST00000443009 864 ntBASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 AP001330.3-201ENST00000520123 633 ntBASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 FLJ16779-201ENST00000612722 7638 ntBASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 AL118508.1-201ENST00000613502 2345 ntBASIC13.16□□□□□ -0.3
CHTOPQ9Y3Y2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 AL359183.1-201ENST00000623796 2132 ntBASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.15□□□□□ -0.3
CHTOPQ9Y3Y2 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CHTOPQ9Y3Y2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CHTOPQ9Y3Y2 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.15□□□□□ -0.31
CHTOPQ9Y3Y2 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CHTOPQ9Y3Y2 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CHTOPQ9Y3Y2 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CHTOPQ9Y3Y2 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CHTOPQ9Y3Y2 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHTOPQ9Y3Y2 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHTOPQ9Y3Y2 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHTOPQ9Y3Y2 AC108860.2-201ENST00000562760 2183 ntBASIC13.14□□□□□ -0.31
CHTOPQ9Y3Y2 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms