Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 TTC38-205ENST00000451998 582 ntTSL 218.86■□□□□ 0.618e-7■■■□□ 17.1
XRN2Q9H0D6 LUZP1-204ENST00000471849 1190 ntTSL 1 (best)18.79■□□□□ 0.64e-6■■■□□ 17.1
XRN2Q9H0D6 H2AFY-213ENST00000508785 966 ntTSL 218.52■□□□□ 0.562e-7■■■□□ 17.1
XRN2Q9H0D6 MGAT1-211ENST00000506269 564 ntTSL 418.16■□□□□ 0.58e-7■■■□□ 17.1
XRN2Q9H0D6 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.05■□□□□ 0.482e-7■■■□□ 17.1
XRN2Q9H0D6 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.81■□□□□ 0.449e-10■■■□□ 17.1
XRN2Q9H0D6 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.61■□□□□ 0.419e-10■■■□□ 17.1
XRN2Q9H0D6 TNPO2-209ENST00000588151 546 ntTSL 317.26■□□□□ 0.351e-6■■■□□ 17.1
XRN2Q9H0D6 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.348e-7■■■□□ 17.1
XRN2Q9H0D6 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.77■□□□□ 0.277e-8■■■□□ 17.1
XRN2Q9H0D6 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.239e-10■■■□□ 17.1
XRN2Q9H0D6 PSME2-202ENST00000471700 706 ntTSL 316.3■□□□□ 0.29e-10■■■□□ 17.1
XRN2Q9H0D6 H2AFY-203ENST00000360597 1772 ntTSL 516.06■□□□□ 0.162e-7■■■□□ 17.1
XRN2Q9H0D6 ESRP2-211ENST00000566774 2072 ntTSL 215.94■□□□□ 0.149e-10■■■□□ 17.1
XRN2Q9H0D6 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.137e-8■■■□□ 17.1
XRN2Q9H0D6 PSME2-206ENST00000559042 643 nt15.7■□□□□ 0.19e-10■■■□□ 17.1
XRN2Q9H0D6 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.19e-10■■■□□ 17.1
XRN2Q9H0D6 PSME2-217ENST00000615264 874 ntTSL 5 BASIC15.49■□□□□ 0.079e-10■■■□□ 17.1
XRN2Q9H0D6 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.048e-7■■■□□ 17.1
XRN2Q9H0D6 RPL3-216ENST00000484358 557 ntTSL 214.83□□□□□ -0.049e-10■■■□□ 17.1
XRN2Q9H0D6 PSME2-204ENST00000558931 2754 ntTSL 514.75□□□□□ -0.059e-10■■■□□ 17.1
XRN2Q9H0D6 PSME2-213ENST00000560410 755 ntTSL 3 BASIC14.31□□□□□ -0.129e-10■■■□□ 17.1
XRN2Q9H0D6 MGAT1-207ENST00000504385 540 ntTSL 413.68□□□□□ -0.228e-7■■■□□ 17.1
XRN2Q9H0D6 PIP5K1A-203ENST00000368890 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.299e-10■■■□□ 17.1
XRN2Q9H0D6 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.338e-7■■■□□ 17.1
XRN2Q9H0D6 RPS11-204ENST00000599167 1133 ntTSL 512.77□□□□□ -0.379e-10■■■□□ 17.1
XRN2Q9H0D6 RPS11-206ENST00000600027 944 ntTSL 512.77□□□□□ -0.379e-10■■■□□ 17.1
XRN2Q9H0D6 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.394e-7■■■□□ 17.1
XRN2Q9H0D6 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.49e-10■■■□□ 17.1
XRN2Q9H0D6 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.439e-10■■■□□ 17.1
XRN2Q9H0D6 ABL2-202ENST00000367623 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.449e-10■■■□□ 17.1
XRN2Q9H0D6 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.469e-10■■■□□ 17.1
XRN2Q9H0D6 LUZP1-201ENST00000302291 8898 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.474e-6■■■□□ 17.1
XRN2Q9H0D6 SORBS2-203ENST00000319471 2824 ntTSL 1 (best) BASIC11.67□□□□□ -0.546e-7■■■□□ 17.1
XRN2Q9H0D6 C1RL-211ENST00000545280 449 ntTSL 3 BASIC11.66□□□□□ -0.544e-7■■■□□ 17.1
XRN2Q9H0D6 H2AFY-215ENST00000510038 1314 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.552e-7■■■□□ 17.1
XRN2Q9H0D6 CRK-203ENST00000572145 830 ntTSL 311.59□□□□□ -0.557e-8■■■□□ 17.1
XRN2Q9H0D6 EIF4G1-236ENST00000484862 590 ntTSL 211.59□□□□□ -0.559e-10■■■□□ 17.1
XRN2Q9H0D6 RPS11-201ENST00000270625 614 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.599e-10■■■□□ 17.1
XRN2Q9H0D6 ABL2-204ENST00000502732 12144 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.69e-10■■■□□ 17.1
XRN2Q9H0D6 H2AFY-201ENST00000304332 1881 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.612e-7■■■□□ 17.1
XRN2Q9H0D6 GLYR1-205ENST00000587297 688 ntTSL 210.85□□□□□ -0.679e-10■■■□□ 17.1
XRN2Q9H0D6 PIP5K1A-201ENST00000349792 3767 ntAPPRIS P3 TSL 1 (best)10.83□□□□□ -0.689e-10■■■□□ 17.1
XRN2Q9H0D6 PSME2-209ENST00000559453 1721 ntTSL 510.03□□□□□ -0.89e-10■■■□□ 17.1
XRN2Q9H0D6 RPS11-209ENST00000602252 751 ntTSL 210□□□□□ -0.819e-10■■■□□ 17.1
XRN2Q9H0D6 SORBS2-201ENST00000284776 5996 ntTSL 1 (best) BASIC9.74□□□□□ -0.856e-7■■■□□ 17.1
XRN2Q9H0D6 SORBS2-231ENST00000449407 3049 ntTSL 1 (best) BASIC9.61□□□□□ -0.876e-7■■■□□ 17.1
XRN2Q9H0D6 PSME2-205ENST00000559005 496 ntTSL 29.5□□□□□ -0.899e-10■■■□□ 17.1
XRN2Q9H0D6 SORBS2-204ENST00000355634 4622 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.926e-7■■■□□ 17.1
XRN2Q9H0D6 CHD6-201ENST00000309279 1635 ntTSL 1 (best) BASIC9.27□□□□□ -0.929e-10■■■□□ 17.1
XRN2Q9H0D6 CHD6-205ENST00000440697 1635 ntTSL 59.27□□□□□ -0.929e-10■■■□□ 17.1
XRN2Q9H0D6 SORBS2-206ENST00000393528 3043 ntTSL 1 (best) BASIC8.92□□□□□ -0.986e-7■■■□□ 17.1
XRN2Q9H0D6 RPS11-208ENST00000601306 547 ntTSL 38.67□□□□□ -1.029e-10■■■□□ 17.1
XRN2Q9H0D6 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC8.48□□□□□ -1.054e-6■■■□□ 17.1
XRN2Q9H0D6 MGAT1-225ENST00000514760 613 ntTSL 38.3□□□□□ -1.088e-7■■■□□ 17.1
XRN2Q9H0D6 RPS11-205ENST00000599561 430 ntTSL 5 BASIC8.04□□□□□ -1.129e-10■■■□□ 17.1
XRN2Q9H0D6 RPS11-202ENST00000594493 575 ntTSL 3 BASIC8.04□□□□□ -1.129e-10■■■□□ 17.1
XRN2Q9H0D6 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.34□□□□□ -1.246e-7■■■□□ 17.1
XRN2Q9H0D6 PIP5K1A-208ENST00000447555 373 ntTSL 1 (best)6.87□□□□□ -1.319e-10■■■□□ 17.1
XRN2Q9H0D6 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.344e-6■■■□□ 17.1
XRN2Q9H0D6 MIR7703-201ENST00000620784 77 ntBASIC6.02□□□□□ -1.459e-10■■■□□ 17.1
XRN2Q9H0D6 DOCK7-229ENST00000637208 8283 ntTSL 55.57□□□□□ -1.529e-10■■■□□ 17.1
XRN2Q9H0D6 DOCK7-226ENST00000636635 122 ntTSL 55.19□□□□□ -1.589e-10■■■□□ 17.1
XRN2Q9H0D6 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.629e-10■■■□□ 17.1
XRN2Q9H0D6 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.659e-10■■■□□ 17.1
XRN2Q9H0D6 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.679e-10■■■□□ 17.1
XRN2Q9H0D6 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.689e-10■■■□□ 17.1
XRN2Q9H0D6 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.39□□□□□ -1.719e-10■■■□□ 17.1
XRN2Q9H0D6 GLYR1-203ENST00000586095 319 ntTSL 24.32□□□□□ -1.729e-10■■■□□ 17.1
XRN2Q9H0D6 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.779e-10■■■□□ 17.1
XRN2Q9H0D6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.26■■□□□ 1.631e-9■■■□□ 17.1
XRN2Q9H0D6 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.915e-12■■■□□ 17.1
XRN2Q9H0D6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.65■■□□□ 1.75e-12■■■□□ 17.1
XRN2Q9H0D6 SNRNP70-204ENST00000595231 1673 ntTSL 1 (best)25.61■■□□□ 1.695e-12■■■□□ 17.1
XRN2Q9H0D6 SNRNP70-209ENST00000601065 1757 ntTSL 324.46■■□□□ 1.515e-12■■■□□ 17.1
XRN2Q9H0D6 SNRNP70-202ENST00000401730 3144 ntTSL 216.67■□□□□ 0.265e-12■■■□□ 17.1
XRN2Q9H0D6 AP2A2-217ENST00000529818 549 ntTSL 412.88□□□□□ -0.358e-7■■■□□ 17.1
XRN2Q9H0D6 LPCAT1-202ENST00000475622 5610 ntTSL 517.69■□□□□ 0.426e-7■■■□□ 17.1
XRN2Q9H0D6 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.256e-7■■■□□ 17.1
XRN2Q9H0D6 STIP1-208ENST00000540501 880 ntTSL 328.91■■■□□ 2.224e-8■■■□□ 17
XRN2Q9H0D6 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.194e-8■■■□□ 17
XRN2Q9H0D6 STIP1-204ENST00000536973 738 ntTSL 515□□□□□ -0.014e-8■■■□□ 17
XRN2Q9H0D6 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.62□□□□□ -0.074e-8■■■□□ 17
XRN2Q9H0D6 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.25□□□□□ -0.134e-8■■■□□ 17
XRN2Q9H0D6 STIP1-211ENST00000543847 772 ntTSL 1 (best) BASIC11.38□□□□□ -0.594e-8■■■□□ 17
XRN2Q9H0D6 STIP1-209ENST00000540736 399 ntTSL 26.68□□□□□ -1.344e-8■■■□□ 17
XRN2Q9H0D6 EIF4G1-208ENST00000413967 2808 ntTSL 218.12■□□□□ 0.495e-8■■■□□ 17
XRN2Q9H0D6 EIF4G1-226ENST00000450424 2658 ntTSL 517.25■□□□□ 0.355e-8■■■□□ 17
XRN2Q9H0D6 EIF4G1-210ENST00000421110 2755 ntTSL 516.88■□□□□ 0.295e-8■■■□□ 17
XRN2Q9H0D6 EIF4G1-213ENST00000426123 2907 ntTSL 214.76□□□□□ -0.055e-8■■■□□ 17
XRN2Q9H0D6 SLC6A8-202ENST00000413787 468 ntTSL 521.31■■□□□ 14e-9■■■□□ 17
XRN2Q9H0D6 SLC6A8-205ENST00000442457 523 ntTSL 314.51□□□□□ -0.094e-9■■■□□ 17
XRN2Q9H0D6 ABCG5-203ENST00000409962 2512 ntTSL 218.42■□□□□ 0.547e-6■■■□□ 17
XRN2Q9H0D6 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.277e-6■■■□□ 17
XRN2Q9H0D6 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.51■□□□□ 0.237e-6■■■□□ 17
XRN2Q9H0D6 ABCG5-204ENST00000486512 3033 ntTSL 1 (best)15.57■□□□□ 0.087e-6■■■□□ 17
XRN2Q9H0D6 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.01■□□□□ 0.153e-6■■■□□ 17
XRN2Q9H0D6 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.72□□□□□ -0.053e-6■■■□□ 17
XRN2Q9H0D6 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.123e-6■■■□□ 17
XRN2Q9H0D6 ZEB1-214ENST00000558863 1355 ntTSL 527.86■■■□□ 2.055e-6■■■□□ 17
Retrieved 100 of 21,068 protein–RNA pairs in 173.3 ms