Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 SBF1P1-201ENST00000444527 5631 ntBASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 KRT8P8-201ENST00000434750 1448 ntBASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 AC097376.2-205ENST00000610159 5334 ntBASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LCE3DQ9BYE3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms