Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.85■□□□□ 0.61
ERCC2P18074 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.85■□□□□ 0.61
ERCC2P18074 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.85■□□□□ 0.61
ERCC2P18074 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC2P18074 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
ERCC2P18074 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC2P18074 PHGDH-209ENST00000641074 1780 ntBASIC18.85■□□□□ 0.61
ERCC2P18074 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.85■□□□□ 0.61
ERCC2P18074 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC2P18074 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC2P18074 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC2P18074 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
ERCC2P18074 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC2P18074 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC2P18074 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
ERCC2P18074 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC2P18074 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC2P18074 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.84■□□□□ 0.61
ERCC2P18074 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.84■□□□□ 0.61
ERCC2P18074 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.84■□□□□ 0.61
ERCC2P18074 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC2P18074 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC2P18074 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC2P18074 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.84■□□□□ 0.61
ERCC2P18074 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
ERCC2P18074 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC2P18074 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
ERCC2P18074 TMPOP1-202ENST00000424642 1267 ntBASIC18.84■□□□□ 0.61
ERCC2P18074 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.84■□□□□ 0.61
ERCC2P18074 KRT18P21-201ENST00000515767 1272 ntBASIC18.84■□□□□ 0.61
ERCC2P18074 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.84■□□□□ 0.61
ERCC2P18074 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
ERCC2P18074 AC079602.3-201ENST00000623931 403 ntBASIC18.84■□□□□ 0.61
ERCC2P18074 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC2P18074 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC2P18074 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC2P18074 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC2P18074 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC2P18074 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC2P18074 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC2P18074 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC2P18074 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC2P18074 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC2P18074 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.84■□□□□ 0.61
ERCC2P18074 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC2P18074 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.84■□□□□ 0.61
ERCC2P18074 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
ERCC2P18074 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ERCC2P18074 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ERCC2P18074 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
ERCC2P18074 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ERCC2P18074 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ERCC2P18074 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ERCC2P18074 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ERCC2P18074 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ERCC2P18074 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.83■□□□□ 0.6
ERCC2P18074 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC2P18074 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC2P18074 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.83■□□□□ 0.6
ERCC2P18074 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC2P18074 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
ERCC2P18074 KRT18P38-201ENST00000449496 1282 ntBASIC18.83■□□□□ 0.6
ERCC2P18074 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.83■□□□□ 0.6
ERCC2P18074 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC2P18074 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC2P18074 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.83■□□□□ 0.6
ERCC2P18074 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
ERCC2P18074 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
ERCC2P18074 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC2P18074 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
ERCC2P18074 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC2P18074 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC2P18074 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
ERCC2P18074 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
ERCC2P18074 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC2P18074 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC2P18074 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC2P18074 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC2P18074 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC2P18074 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
ERCC2P18074 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.82■□□□□ 0.6
ERCC2P18074 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC2P18074 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC2P18074 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.82■□□□□ 0.6
ERCC2P18074 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC2P18074 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC2P18074 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.82■□□□□ 0.6
ERCC2P18074 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC2P18074 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
ERCC2P18074 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC2P18074 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
ERCC2P18074 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC2P18074 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC2P18074 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC2P18074 HOMER2P1-201ENST00000455653 964 ntBASIC18.82■□□□□ 0.6
ERCC2P18074 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.82■□□□□ 0.6
ERCC2P18074 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ERCC2P18074 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC2P18074 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC2P18074 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms