Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 IER3-202ENST00000376377 1350 ntBASIC18.78■□□□□ 0.6
MT-CO1P00395 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
MT-CO1P00395 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
MT-CO1P00395 ANO7L1-203ENST00000602586 1720 ntBASIC18.77■□□□□ 0.6
MT-CO1P00395 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MT-CO1P00395 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MT-CO1P00395 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.77■□□□□ 0.6
MT-CO1P00395 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
MT-CO1P00395 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MT-CO1P00395 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MT-CO1P00395 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
MT-CO1P00395 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MT-CO1P00395 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MT-CO1P00395 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.77■□□□□ 0.6
MT-CO1P00395 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.77■□□□□ 0.6
MT-CO1P00395 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MT-CO1P00395 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
MT-CO1P00395 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MT-CO1P00395 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
MT-CO1P00395 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
MT-CO1P00395 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
MT-CO1P00395 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.77■□□□□ 0.59
MT-CO1P00395 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.77■□□□□ 0.59
MT-CO1P00395 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.59
MT-CO1P00395 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
MT-CO1P00395 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
MT-CO1P00395 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
MT-CO1P00395 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MT-CO1P00395 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MT-CO1P00395 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
MT-CO1P00395 AL031598.1-201ENST00000561511 1773 ntBASIC18.76■□□□□ 0.59
MT-CO1P00395 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MT-CO1P00395 AP000593.1-201ENST00000393668 712 ntBASIC18.76■□□□□ 0.59
MT-CO1P00395 UPK3BP1-201ENST00000428678 509 ntBASIC18.76■□□□□ 0.59
MT-CO1P00395 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
MT-CO1P00395 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.76■□□□□ 0.59
MT-CO1P00395 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.76■□□□□ 0.59
MT-CO1P00395 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MT-CO1P00395 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
MT-CO1P00395 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.76■□□□□ 0.59
MT-CO1P00395 HCG11-201ENST00000411553 5696 ntBASIC18.76■□□□□ 0.59
MT-CO1P00395 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.76■□□□□ 0.59
MT-CO1P00395 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.76■□□□□ 0.59
MT-CO1P00395 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
MT-CO1P00395 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MT-CO1P00395 AC093525.10-201ENST00000625130 1569 ntBASIC18.76■□□□□ 0.59
MT-CO1P00395 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
MT-CO1P00395 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MT-CO1P00395 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.75■□□□□ 0.59
MT-CO1P00395 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.75■□□□□ 0.59
MT-CO1P00395 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MT-CO1P00395 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
MT-CO1P00395 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MT-CO1P00395 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MT-CO1P00395 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MT-CO1P00395 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.75■□□□□ 0.59
MT-CO1P00395 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MT-CO1P00395 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MT-CO1P00395 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MT-CO1P00395 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MT-CO1P00395 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MT-CO1P00395 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.75■□□□□ 0.59
MT-CO1P00395 PVRIG2P-201ENST00000435460 978 ntBASIC18.75■□□□□ 0.59
MT-CO1P00395 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.75■□□□□ 0.59
MT-CO1P00395 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.75■□□□□ 0.59
MT-CO1P00395 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
MT-CO1P00395 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
MT-CO1P00395 MYLKP1-201ENST00000509077 1580 ntBASIC18.75■□□□□ 0.59
MT-CO1P00395 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MT-CO1P00395 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
MT-CO1P00395 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.75■□□□□ 0.59
MT-CO1P00395 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MT-CO1P00395 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MT-CO1P00395 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MT-CO1P00395 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.75■□□□□ 0.59
MT-CO1P00395 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.74■□□□□ 0.59
MT-CO1P00395 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.74■□□□□ 0.59
MT-CO1P00395 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
MT-CO1P00395 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MT-CO1P00395 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MT-CO1P00395 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MT-CO1P00395 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MT-CO1P00395 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MT-CO1P00395 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.74■□□□□ 0.59
MT-CO1P00395 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.74■□□□□ 0.59
MT-CO1P00395 AL645929.1-201ENST00000420084 975 ntBASIC18.74■□□□□ 0.59
MT-CO1P00395 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.74■□□□□ 0.59
MT-CO1P00395 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.74■□□□□ 0.59
MT-CO1P00395 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.74■□□□□ 0.59
MT-CO1P00395 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.74■□□□□ 0.59
MT-CO1P00395 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.74■□□□□ 0.59
MT-CO1P00395 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.74■□□□□ 0.59
MT-CO1P00395 AL138781.2-201ENST00000617896 1843 ntBASIC18.74■□□□□ 0.59
MT-CO1P00395 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
MT-CO1P00395 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
MT-CO1P00395 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MT-CO1P00395 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.74■□□□□ 0.59
MT-CO1P00395 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MT-CO1P00395 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.74■□□□□ 0.59
MT-CO1P00395 AC112777.1-201ENST00000540175 1423 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms