Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
NKX2-2O95096 AC007613.1-201ENST00000572811 2597 ntBASIC16.91■□□□□ 0.3
NKX2-2O95096 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX2-2O95096 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX2-2O95096 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NKX2-2O95096 REXO1L9P-201ENST00000604264 2108 ntBASIC16.91■□□□□ 0.3
NKX2-2O95096 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX2-2O95096 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX2-2O95096 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX2-2O95096 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
NKX2-2O95096 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NKX2-2O95096 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NKX2-2O95096 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NKX2-2O95096 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NKX2-2O95096 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX2-2O95096 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.9■□□□□ 0.3
NKX2-2O95096 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX2-2O95096 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX2-2O95096 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX2-2O95096 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX2-2O95096 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
NKX2-2O95096 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
NKX2-2O95096 STARP1-201ENST00000397973 869 ntBASIC16.9■□□□□ 0.3
NKX2-2O95096 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.9■□□□□ 0.3
NKX2-2O95096 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.9■□□□□ 0.3
NKX2-2O95096 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.9■□□□□ 0.3
NKX2-2O95096 AC008687.5-201ENST00000593746 558 ntBASIC16.9■□□□□ 0.3
NKX2-2O95096 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX2-2O95096 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX2-2O95096 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.9■□□□□ 0.3
NKX2-2O95096 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.9■□□□□ 0.3
NKX2-2O95096 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NKX2-2O95096 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NKX2-2O95096 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX2-2O95096 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.9■□□□□ 0.3
NKX2-2O95096 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX2-2O95096 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX2-2O95096 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
NKX2-2O95096 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
NKX2-2O95096 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NKX2-2O95096 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.89■□□□□ 0.3
NKX2-2O95096 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NKX2-2O95096 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NKX2-2O95096 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
NKX2-2O95096 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.89■□□□□ 0.29
NKX2-2O95096 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.89■□□□□ 0.29
NKX2-2O95096 AC138028.4-201ENST00000564984 1845 ntBASIC16.89■□□□□ 0.29
NKX2-2O95096 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NKX2-2O95096 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NKX2-2O95096 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NKX2-2O95096 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
NKX2-2O95096 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NKX2-2O95096 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NKX2-2O95096 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NKX2-2O95096 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NKX2-2O95096 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NKX2-2O95096 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NKX2-2O95096 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NKX2-2O95096 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NKX2-2O95096 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.89■□□□□ 0.29
NKX2-2O95096 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.89■□□□□ 0.29
NKX2-2O95096 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.89■□□□□ 0.29
NKX2-2O95096 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.89■□□□□ 0.29
NKX2-2O95096 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
NKX2-2O95096 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.89■□□□□ 0.29
NKX2-2O95096 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.89■□□□□ 0.29
NKX2-2O95096 AC006011.2-201ENST00000621313 1158 ntBASIC16.89■□□□□ 0.29
NKX2-2O95096 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NKX2-2O95096 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NKX2-2O95096 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NKX2-2O95096 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NKX2-2O95096 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NKX2-2O95096 FLJ13224-201ENST00000313737 1514 ntBASIC16.89■□□□□ 0.29
NKX2-2O95096 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NKX2-2O95096 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
NKX2-2O95096 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.89■□□□□ 0.29
NKX2-2O95096 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.89■□□□□ 0.29
NKX2-2O95096 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NKX2-2O95096 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NKX2-2O95096 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.89■□□□□ 0.29
NKX2-2O95096 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NKX2-2O95096 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX2-2O95096 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX2-2O95096 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.88■□□□□ 0.29
NKX2-2O95096 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX2-2O95096 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX2-2O95096 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX2-2O95096 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NKX2-2O95096 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX2-2O95096 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX2-2O95096 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX2-2O95096 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
NKX2-2O95096 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX2-2O95096 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.88■□□□□ 0.29
NKX2-2O95096 RNF152P1-201ENST00000397754 604 ntBASIC16.88■□□□□ 0.29
NKX2-2O95096 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NKX2-2O95096 SPDYE15P-201ENST00000424157 909 ntBASIC16.88■□□□□ 0.29
NKX2-2O95096 TSPY5P-201ENST00000426936 936 ntBASIC16.88■□□□□ 0.29
NKX2-2O95096 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX2-2O95096 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms