Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
UPK1BO75841 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1BO75841 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1BO75841 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1BO75841 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
UPK1BO75841 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1BO75841 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1BO75841 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1BO75841 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
UPK1BO75841 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1BO75841 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1BO75841 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1BO75841 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC15.98■□□□□ 0.15
UPK1BO75841 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1BO75841 AL355312.1-201ENST00000407115 2176 ntBASIC15.98■□□□□ 0.15
UPK1BO75841 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1BO75841 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
UPK1BO75841 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1BO75841 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC15.98■□□□□ 0.15
UPK1BO75841 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1BO75841 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1BO75841 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1BO75841 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1BO75841 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1BO75841 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.98■□□□□ 0.15
UPK1BO75841 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
UPK1BO75841 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.98■□□□□ 0.15
UPK1BO75841 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.98■□□□□ 0.15
UPK1BO75841 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC15.98■□□□□ 0.15
UPK1BO75841 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1BO75841 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
UPK1BO75841 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
UPK1BO75841 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
UPK1BO75841 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.98■□□□□ 0.15
UPK1BO75841 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1BO75841 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.97■□□□□ 0.15
UPK1BO75841 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1BO75841 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1BO75841 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1BO75841 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1BO75841 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
UPK1BO75841 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.97■□□□□ 0.15
UPK1BO75841 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
UPK1BO75841 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.97■□□□□ 0.15
UPK1BO75841 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.97■□□□□ 0.15
UPK1BO75841 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
UPK1BO75841 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1BO75841 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1BO75841 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1BO75841 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC15.97■□□□□ 0.15
UPK1BO75841 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
UPK1BO75841 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC15.97■□□□□ 0.15
UPK1BO75841 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1BO75841 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.97■□□□□ 0.15
UPK1BO75841 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1BO75841 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
UPK1BO75841 KRT18P55-202ENST00000578578 1546 ntBASIC15.97■□□□□ 0.15
UPK1BO75841 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1BO75841 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1BO75841 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1BO75841 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.97■□□□□ 0.15
UPK1BO75841 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
UPK1BO75841 GCK-205ENST00000437084 1385 ntTSL 5 BASIC15.97■□□□□ 0.15
UPK1BO75841 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1BO75841 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1BO75841 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1BO75841 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.97■□□□□ 0.15
UPK1BO75841 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
UPK1BO75841 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UPK1BO75841 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
UPK1BO75841 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
UPK1BO75841 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
UPK1BO75841 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
UPK1BO75841 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
UPK1BO75841 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
UPK1BO75841 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.96■□□□□ 0.15
UPK1BO75841 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
UPK1BO75841 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
UPK1BO75841 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
UPK1BO75841 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
UPK1BO75841 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UPK1BO75841 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
UPK1BO75841 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.96■□□□□ 0.15
UPK1BO75841 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
UPK1BO75841 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC15.96■□□□□ 0.15
UPK1BO75841 RPP21-222ENST00000433076 577 ntTSL 2 BASIC15.96■□□□□ 0.15
UPK1BO75841 PBX1-209ENST00000485769 834 ntTSL 2 BASIC15.96■□□□□ 0.15
UPK1BO75841 AC100791.3-201ENST00000617619 330 ntBASIC15.96■□□□□ 0.15
UPK1BO75841 HYMAI-201ENST00000635591 3347 ntBASIC15.96■□□□□ 0.15
UPK1BO75841 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
UPK1BO75841 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UPK1BO75841 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
UPK1BO75841 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UPK1BO75841 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
UPK1BO75841 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
UPK1BO75841 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
UPK1BO75841 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
UPK1BO75841 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
UPK1BO75841 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
UPK1BO75841 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms