Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
YJEFN3A6XGL0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.08■□□□□ 0.64
YJEFN3A6XGL0 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
YJEFN3A6XGL0 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
YJEFN3A6XGL0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.08■□□□□ 0.64
YJEFN3A6XGL0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
YJEFN3A6XGL0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
YJEFN3A6XGL0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
YJEFN3A6XGL0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
YJEFN3A6XGL0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
YJEFN3A6XGL0 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
YJEFN3A6XGL0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
YJEFN3A6XGL0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
YJEFN3A6XGL0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
YJEFN3A6XGL0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
YJEFN3A6XGL0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
YJEFN3A6XGL0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
YJEFN3A6XGL0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.07■□□□□ 0.64
YJEFN3A6XGL0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
YJEFN3A6XGL0 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
YJEFN3A6XGL0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
YJEFN3A6XGL0 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.07■□□□□ 0.64
YJEFN3A6XGL0 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
YJEFN3A6XGL0 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
YJEFN3A6XGL0 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.07■□□□□ 0.64
YJEFN3A6XGL0 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.07■□□□□ 0.64
YJEFN3A6XGL0 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
YJEFN3A6XGL0 AL390719.2-201ENST00000606993 987 ntBASIC19.07■□□□□ 0.64
YJEFN3A6XGL0 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.07■□□□□ 0.64
YJEFN3A6XGL0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
YJEFN3A6XGL0 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.07■□□□□ 0.64
YJEFN3A6XGL0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
YJEFN3A6XGL0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
YJEFN3A6XGL0 AC135776.1-201ENST00000319817 2481 ntBASIC19.07■□□□□ 0.64
YJEFN3A6XGL0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
YJEFN3A6XGL0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
YJEFN3A6XGL0 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 PHGDH-209ENST00000641074 1780 ntBASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 TSPY22P-201ENST00000427496 604 ntBASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 UPK3BP1-201ENST00000428678 509 ntBASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 GPR32P1-201ENST00000601788 811 ntBASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 AC004263.2-201ENST00000617183 678 ntBASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
YJEFN3A6XGL0 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.05■□□□□ 0.64
YJEFN3A6XGL0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
YJEFN3A6XGL0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
YJEFN3A6XGL0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
YJEFN3A6XGL0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
YJEFN3A6XGL0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
YJEFN3A6XGL0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
YJEFN3A6XGL0 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
YJEFN3A6XGL0 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
YJEFN3A6XGL0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
YJEFN3A6XGL0 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
YJEFN3A6XGL0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
YJEFN3A6XGL0 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.05■□□□□ 0.64
YJEFN3A6XGL0 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
YJEFN3A6XGL0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.05■□□□□ 0.64
YJEFN3A6XGL0 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.05■□□□□ 0.64
YJEFN3A6XGL0 AC113404.2-201ENST00000507884 177 ntBASIC19.05■□□□□ 0.64
YJEFN3A6XGL0 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.05■□□□□ 0.64
YJEFN3A6XGL0 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.05■□□□□ 0.64
YJEFN3A6XGL0 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms