Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TBC1D3FA6NER0 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TBC1D3FA6NER0 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TBC1D3FA6NER0 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TBC1D3FA6NER0 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TBC1D3FA6NER0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TBC1D3FA6NER0 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.23■□□□□ 0.51
TBC1D3FA6NER0 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.23■□□□□ 0.51
TBC1D3FA6NER0 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.23■□□□□ 0.51
TBC1D3FA6NER0 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TBC1D3FA6NER0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.23■□□□□ 0.51
TBC1D3FA6NER0 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.23■□□□□ 0.51
TBC1D3FA6NER0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.23■□□□□ 0.51
TBC1D3FA6NER0 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TBC1D3FA6NER0 AL499627.1-201ENST00000569373 2188 ntBASIC18.23■□□□□ 0.51
TBC1D3FA6NER0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TBC1D3FA6NER0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TBC1D3FA6NER0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TBC1D3FA6NER0 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TBC1D3FA6NER0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TBC1D3FA6NER0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TBC1D3FA6NER0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TBC1D3FA6NER0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TBC1D3FA6NER0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TBC1D3FA6NER0 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TBC1D3FA6NER0 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TBC1D3FA6NER0 IGHV3-47-201ENST00000425060 335 ntBASIC18.22■□□□□ 0.51
TBC1D3FA6NER0 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.22■□□□□ 0.51
TBC1D3FA6NER0 MINOS1P3-201ENST00000457048 203 ntBASIC18.22■□□□□ 0.51
TBC1D3FA6NER0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.22■□□□□ 0.51
TBC1D3FA6NER0 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TBC1D3FA6NER0 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TBC1D3FA6NER0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.22■□□□□ 0.51
TBC1D3FA6NER0 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.22■□□□□ 0.51
TBC1D3FA6NER0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.22■□□□□ 0.51
TBC1D3FA6NER0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TBC1D3FA6NER0 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TBC1D3FA6NER0 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TBC1D3FA6NER0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TBC1D3FA6NER0 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TBC1D3FA6NER0 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.22■□□□□ 0.51
TBC1D3FA6NER0 SDHAP2-201ENST00000455183 2001 ntBASIC18.22■□□□□ 0.51
TBC1D3FA6NER0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TBC1D3FA6NER0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TBC1D3FA6NER0 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TBC1D3FA6NER0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
TBC1D3FA6NER0 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TBC1D3FA6NER0 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TBC1D3FA6NER0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TBC1D3FA6NER0 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TBC1D3FA6NER0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TBC1D3FA6NER0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TBC1D3FA6NER0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TBC1D3FA6NER0 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TBC1D3FA6NER0 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
TBC1D3FA6NER0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TBC1D3FA6NER0 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.21■□□□□ 0.51
TBC1D3FA6NER0 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
TBC1D3FA6NER0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TBC1D3FA6NER0 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.21■□□□□ 0.51
TBC1D3FA6NER0 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TBC1D3FA6NER0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TBC1D3FA6NER0 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TBC1D3FA6NER0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.21■□□□□ 0.51
TBC1D3FA6NER0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.21■□□□□ 0.51
TBC1D3FA6NER0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TBC1D3FA6NER0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TBC1D3FA6NER0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TBC1D3FA6NER0 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.2■□□□□ 0.5
TBC1D3FA6NER0 NSUN5P1-202ENST00000421140 1535 ntBASIC18.2■□□□□ 0.5
TBC1D3FA6NER0 NSUN5P2-203ENST00000457352 1529 ntBASIC18.2■□□□□ 0.5
TBC1D3FA6NER0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.2■□□□□ 0.5
TBC1D3FA6NER0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TBC1D3FA6NER0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.2■□□□□ 0.5
TBC1D3FA6NER0 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
TBC1D3FA6NER0 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
TBC1D3FA6NER0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TBC1D3FA6NER0 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TBC1D3FA6NER0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
TBC1D3FA6NER0 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.2■□□□□ 0.5
TBC1D3FA6NER0 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TBC1D3FA6NER0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.2■□□□□ 0.5
TBC1D3FA6NER0 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TBC1D3FA6NER0 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.2■□□□□ 0.5
TBC1D3FA6NER0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TBC1D3FA6NER0 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TBC1D3FA6NER0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TBC1D3FA6NER0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TBC1D3FA6NER0 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TBC1D3FA6NER0 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
TBC1D3FA6NER0 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TBC1D3FA6NER0 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TBC1D3FA6NER0 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.19■□□□□ 0.5
TBC1D3FA6NER0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TBC1D3FA6NER0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TBC1D3FA6NER0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TBC1D3FA6NER0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
TBC1D3FA6NER0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TBC1D3FA6NER0 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TBC1D3FA6NER0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms