Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PGBD3Q8N328 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PGBD3Q8N328 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.61■□□□□ 0.57
PGBD3Q8N328 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD3Q8N328 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD3Q8N328 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD3Q8N328 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.61■□□□□ 0.57
PGBD3Q8N328 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD3Q8N328 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.61■□□□□ 0.57
PGBD3Q8N328 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PGBD3Q8N328 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD3Q8N328 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD3Q8N328 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.61■□□□□ 0.57
PGBD3Q8N328 AC079781.3-201ENST00000449110 356 ntBASIC18.61■□□□□ 0.57
PGBD3Q8N328 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.61■□□□□ 0.57
PGBD3Q8N328 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.61■□□□□ 0.57
PGBD3Q8N328 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.61■□□□□ 0.57
PGBD3Q8N328 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD3Q8N328 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.61■□□□□ 0.57
PGBD3Q8N328 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.61■□□□□ 0.57
PGBD3Q8N328 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.61■□□□□ 0.57
PGBD3Q8N328 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.61■□□□□ 0.57
PGBD3Q8N328 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD3Q8N328 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.61■□□□□ 0.57
PGBD3Q8N328 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD3Q8N328 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PGBD3Q8N328 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD3Q8N328 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD3Q8N328 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PGBD3Q8N328 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.6■□□□□ 0.57
PGBD3Q8N328 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.6■□□□□ 0.57
PGBD3Q8N328 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.6■□□□□ 0.57
PGBD3Q8N328 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.6■□□□□ 0.57
PGBD3Q8N328 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.6■□□□□ 0.57
PGBD3Q8N328 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.6■□□□□ 0.57
PGBD3Q8N328 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
PGBD3Q8N328 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
PGBD3Q8N328 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PGBD3Q8N328 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PGBD3Q8N328 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.6■□□□□ 0.57
PGBD3Q8N328 AC233702.3-201ENST00000578656 1387 ntBASIC18.6■□□□□ 0.57
PGBD3Q8N328 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PGBD3Q8N328 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PGBD3Q8N328 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PGBD3Q8N328 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.6■□□□□ 0.57
PGBD3Q8N328 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PGBD3Q8N328 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PGBD3Q8N328 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
PGBD3Q8N328 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.6■□□□□ 0.57
PGBD3Q8N328 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.6■□□□□ 0.57
PGBD3Q8N328 VENTXP7-201ENST00000475503 772 ntBASIC18.6■□□□□ 0.57
PGBD3Q8N328 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.6■□□□□ 0.57
PGBD3Q8N328 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PGBD3Q8N328 AL160237.2-201ENST00000556165 472 ntBASIC18.6■□□□□ 0.57
PGBD3Q8N328 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.6■□□□□ 0.57
PGBD3Q8N328 AC009065.1-201ENST00000564055 1225 ntBASIC18.6■□□□□ 0.57
PGBD3Q8N328 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PGBD3Q8N328 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
PGBD3Q8N328 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PGBD3Q8N328 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PGBD3Q8N328 FP475955.4-201ENST00000623131 1990 ntBASIC18.6■□□□□ 0.57
PGBD3Q8N328 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PGBD3Q8N328 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PGBD3Q8N328 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PGBD3Q8N328 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.6■□□□□ 0.57
PGBD3Q8N328 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.6■□□□□ 0.57
PGBD3Q8N328 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PGBD3Q8N328 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PGBD3Q8N328 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.6■□□□□ 0.57
PGBD3Q8N328 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.6■□□□□ 0.57
PGBD3Q8N328 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PGBD3Q8N328 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PGBD3Q8N328 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PGBD3Q8N328 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
PGBD3Q8N328 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.59■□□□□ 0.57
PGBD3Q8N328 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PGBD3Q8N328 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PGBD3Q8N328 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PGBD3Q8N328 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PGBD3Q8N328 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
PGBD3Q8N328 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
PGBD3Q8N328 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PGBD3Q8N328 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PGBD3Q8N328 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PGBD3Q8N328 AP000347.1-202ENST00000435868 847 ntBASIC18.59■□□□□ 0.57
PGBD3Q8N328 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.59■□□□□ 0.57
PGBD3Q8N328 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PGBD3Q8N328 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.59■□□□□ 0.57
PGBD3Q8N328 MIR3180-4-201ENST00000582223 153 ntBASIC18.59■□□□□ 0.57
PGBD3Q8N328 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.59■□□□□ 0.57
PGBD3Q8N328 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.59■□□□□ 0.57
PGBD3Q8N328 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PGBD3Q8N328 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PGBD3Q8N328 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.59■□□□□ 0.57
PGBD3Q8N328 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PGBD3Q8N328 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
PGBD3Q8N328 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
PGBD3Q8N328 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PGBD3Q8N328 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PGBD3Q8N328 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms