Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.08■□□□□ 0.16
CHRFAM7AQ494W8 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHRFAM7AQ494W8 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CHRFAM7AQ494W8 KRT8P8-201ENST00000434750 1448 ntBASIC16.08■□□□□ 0.16
CHRFAM7AQ494W8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHRFAM7AQ494W8 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CHRFAM7AQ494W8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.08■□□□□ 0.16
CHRFAM7AQ494W8 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHRFAM7AQ494W8 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHRFAM7AQ494W8 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHRFAM7AQ494W8 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.08■□□□□ 0.16
CHRFAM7AQ494W8 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
CHRFAM7AQ494W8 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHRFAM7AQ494W8 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CHRFAM7AQ494W8 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHRFAM7AQ494W8 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CHRFAM7AQ494W8 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 AL133373.2-201ENST00000623187 2828 ntBASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 TSPY5P-201ENST00000426936 936 ntBASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 AC091390.4-202ENST00000476426 537 ntBASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 SLC25A1P4-201ENST00000567977 778 ntBASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 AP006587.1-201ENST00000534129 1502 ntBASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 FEM1AP3-201ENST00000403722 1741 ntBASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRFAM7AQ494W8 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 AL450487.1-201ENST00000426799 995 ntBASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 CCR12P-201ENST00000446203 998 ntBASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 AC093458.2-201ENST00000623150 629 ntBASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRFAM7AQ494W8 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHRFAM7AQ494W8 ANO7L1-203ENST00000602586 1720 ntBASIC16.05■□□□□ 0.16
CHRFAM7AQ494W8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRFAM7AQ494W8 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.05■□□□□ 0.16
CHRFAM7AQ494W8 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms