Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC12.37□□□□□ -0.43
SNCGO76070 AICDA-202ENST00000537228 667 ntTSL 5 BASIC12.37□□□□□ -0.43
SNCGO76070 HSD17B1P1-201ENST00000590052 955 ntBASIC12.37□□□□□ -0.43
SNCGO76070 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNCGO76070 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SNCGO76070 AL358852.1-201ENST00000623174 1268 ntBASIC12.37□□□□□ -0.43
SNCGO76070 SF1-220ENST00000626028 704 ntTSL 2 BASIC12.37□□□□□ -0.43
SNCGO76070 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SNCGO76070 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNCGO76070 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.37□□□□□ -0.43
SNCGO76070 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNCGO76070 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNCGO76070 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNCGO76070 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC12.37□□□□□ -0.43
SNCGO76070 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SNCGO76070 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNCGO76070 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNCGO76070 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SNCGO76070 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNCGO76070 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC12.37□□□□□ -0.43
SNCGO76070 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNCGO76070 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC12.37□□□□□ -0.43
SNCGO76070 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC12.37□□□□□ -0.43
SNCGO76070 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCGO76070 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC12.36□□□□□ -0.43
SNCGO76070 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC12.36□□□□□ -0.43
SNCGO76070 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCGO76070 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
SNCGO76070 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC12.36□□□□□ -0.43
SNCGO76070 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SNCGO76070 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC12.36□□□□□ -0.43
SNCGO76070 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCGO76070 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCGO76070 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SNCGO76070 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC12.36□□□□□ -0.43
SNCGO76070 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC12.36□□□□□ -0.43
SNCGO76070 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCGO76070 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
SNCGO76070 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCGO76070 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC12.36□□□□□ -0.43
SNCGO76070 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SNCGO76070 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC12.36□□□□□ -0.43
SNCGO76070 AC093525.10-201ENST00000625130 1569 ntBASIC12.36□□□□□ -0.43
SNCGO76070 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
SNCGO76070 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SNCGO76070 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCGO76070 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC12.36□□□□□ -0.43
SNCGO76070 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCGO76070 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC12.36□□□□□ -0.43
SNCGO76070 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCGO76070 AC007322.3-201ENST00000426526 701 ntBASIC12.36□□□□□ -0.43
SNCGO76070 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC12.36□□□□□ -0.43
SNCGO76070 TRIR-202ENST00000588213 841 ntTSL 3 BASIC12.36□□□□□ -0.43
SNCGO76070 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC12.36□□□□□ -0.43
SNCGO76070 AC012354.3-201ENST00000623734 483 ntBASIC12.36□□□□□ -0.43
SNCGO76070 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SNCGO76070 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
SNCGO76070 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SNCGO76070 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC12.36□□□□□ -0.43
SNCGO76070 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCGO76070 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCGO76070 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCGO76070 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCGO76070 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SNCGO76070 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCGO76070 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCGO76070 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SNCGO76070 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCGO76070 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC12.36□□□□□ -0.43
SNCGO76070 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC12.36□□□□□ -0.43
SNCGO76070 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC12.36□□□□□ -0.43
SNCGO76070 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SNCGO76070 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SNCGO76070 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCGO76070 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCGO76070 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SNCGO76070 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SNCGO76070 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SNCGO76070 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SNCGO76070 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SNCGO76070 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SNCGO76070 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SNCGO76070 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SNCGO76070 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SNCGO76070 AC005052.1-201ENST00000625181 2492 ntBASIC12.35□□□□□ -0.43
SNCGO76070 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC12.35□□□□□ -0.43
SNCGO76070 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC12.35□□□□□ -0.43
SNCGO76070 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
SNCGO76070 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
SNCGO76070 AC141586.3-201ENST00000562166 1838 ntBASIC12.35□□□□□ -0.43
SNCGO76070 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SNCGO76070 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC12.35□□□□□ -0.43
SNCGO76070 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC12.35□□□□□ -0.43
SNCGO76070 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SNCGO76070 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
SNCGO76070 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC12.35□□□□□ -0.43
SNCGO76070 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SNCGO76070 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC12.35□□□□□ -0.43
SNCGO76070 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SNCGO76070 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms