Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN3Q9H347 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.05■□□□□ 0.32
UBQLN3Q9H347 AL441883.1-201ENST00000566170 1045 ntBASIC17.05■□□□□ 0.32
UBQLN3Q9H347 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.05■□□□□ 0.32
UBQLN3Q9H347 MIR3180-5-201ENST00000583743 153 ntBASIC17.05■□□□□ 0.32
UBQLN3Q9H347 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN3Q9H347 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
UBQLN3Q9H347 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN3Q9H347 AL023973.1-201ENST00000624619 620 ntBASIC17.05■□□□□ 0.32
UBQLN3Q9H347 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN3Q9H347 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN3Q9H347 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.05■□□□□ 0.32
UBQLN3Q9H347 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.05■□□□□ 0.32
UBQLN3Q9H347 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.05■□□□□ 0.32
UBQLN3Q9H347 AC036111.1-201ENST00000533973 1582 ntBASIC17.05■□□□□ 0.32
UBQLN3Q9H347 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN3Q9H347 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN3Q9H347 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.05■□□□□ 0.32
UBQLN3Q9H347 KRT8P32-201ENST00000512863 1461 ntBASIC17.05■□□□□ 0.32
UBQLN3Q9H347 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN3Q9H347 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.04■□□□□ 0.32
UBQLN3Q9H347 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.04■□□□□ 0.32
UBQLN3Q9H347 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
UBQLN3Q9H347 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN3Q9H347 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.04■□□□□ 0.32
UBQLN3Q9H347 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN3Q9H347 HEIH-201ENST00000623091 1652 ntBASIC17.04■□□□□ 0.32
UBQLN3Q9H347 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN3Q9H347 ABALON-201ENST00000629058 1903 ntBASIC17.04■□□□□ 0.32
UBQLN3Q9H347 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.04■□□□□ 0.32
UBQLN3Q9H347 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
UBQLN3Q9H347 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN3Q9H347 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.04■□□□□ 0.32
UBQLN3Q9H347 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN3Q9H347 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN3Q9H347 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.04■□□□□ 0.32
UBQLN3Q9H347 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN3Q9H347 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN3Q9H347 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.04■□□□□ 0.32
UBQLN3Q9H347 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.04■□□□□ 0.32
UBQLN3Q9H347 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.04■□□□□ 0.32
UBQLN3Q9H347 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN3Q9H347 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.04■□□□□ 0.32
UBQLN3Q9H347 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.04■□□□□ 0.32
UBQLN3Q9H347 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.04■□□□□ 0.32
UBQLN3Q9H347 NTF6B-201ENST00000591913 560 ntBASIC17.04■□□□□ 0.32
UBQLN3Q9H347 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
UBQLN3Q9H347 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN3Q9H347 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.04■□□□□ 0.32
UBQLN3Q9H347 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
UBQLN3Q9H347 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN3Q9H347 RCC2P3-201ENST00000418112 1537 ntBASIC17.04■□□□□ 0.32
UBQLN3Q9H347 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
UBQLN3Q9H347 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN3Q9H347 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
UBQLN3Q9H347 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN3Q9H347 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN3Q9H347 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN3Q9H347 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN3Q9H347 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.03■□□□□ 0.32
UBQLN3Q9H347 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN3Q9H347 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.03■□□□□ 0.32
UBQLN3Q9H347 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN3Q9H347 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN3Q9H347 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.03■□□□□ 0.32
UBQLN3Q9H347 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.03■□□□□ 0.32
UBQLN3Q9H347 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN3Q9H347 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN3Q9H347 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.03■□□□□ 0.32
UBQLN3Q9H347 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN3Q9H347 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN3Q9H347 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.03■□□□□ 0.32
UBQLN3Q9H347 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.03■□□□□ 0.32
UBQLN3Q9H347 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.03■□□□□ 0.32
UBQLN3Q9H347 LINC01238-205ENST00000567549 1107 ntBASIC17.03■□□□□ 0.32
UBQLN3Q9H347 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.03■□□□□ 0.32
UBQLN3Q9H347 MYC-208ENST00000641036 567 ntBASIC17.03■□□□□ 0.32
UBQLN3Q9H347 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
UBQLN3Q9H347 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.03■□□□□ 0.32
UBQLN3Q9H347 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.03■□□□□ 0.32
UBQLN3Q9H347 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN3Q9H347 NOC2LP2-201ENST00000407594 1944 ntBASIC17.03■□□□□ 0.32
UBQLN3Q9H347 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.03■□□□□ 0.32
UBQLN3Q9H347 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN3Q9H347 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN3Q9H347 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.03■□□□□ 0.32
UBQLN3Q9H347 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.03■□□□□ 0.32
UBQLN3Q9H347 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN3Q9H347 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN3Q9H347 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN3Q9H347 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN3Q9H347 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBQLN3Q9H347 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
UBQLN3Q9H347 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
UBQLN3Q9H347 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBQLN3Q9H347 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBQLN3Q9H347 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBQLN3Q9H347 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBQLN3Q9H347 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBQLN3Q9H347 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms