Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.76■■□□□ 1.07
NEK1Q96PY6 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
NEK1Q96PY6 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.76■■□□□ 1.07
NEK1Q96PY6 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.76■■□□□ 1.07
NEK1Q96PY6 AC009065.1-201ENST00000564055 1225 ntBASIC21.76■■□□□ 1.07
NEK1Q96PY6 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NEK1Q96PY6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
NEK1Q96PY6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NEK1Q96PY6 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NEK1Q96PY6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
NEK1Q96PY6 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
NEK1Q96PY6 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NEK1Q96PY6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.75■■□□□ 1.07
NEK1Q96PY6 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
NEK1Q96PY6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
NEK1Q96PY6 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NEK1Q96PY6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NEK1Q96PY6 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.75■■□□□ 1.07
NEK1Q96PY6 NOC2LP1-202ENST00000452600 2235 ntBASIC21.75■■□□□ 1.07
NEK1Q96PY6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NEK1Q96PY6 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NEK1Q96PY6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC21.75■■□□□ 1.07
NEK1Q96PY6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NEK1Q96PY6 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.75■■□□□ 1.07
NEK1Q96PY6 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.75■■□□□ 1.07
NEK1Q96PY6 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.75■■□□□ 1.07
NEK1Q96PY6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NEK1Q96PY6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.75■■□□□ 1.07
NEK1Q96PY6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NEK1Q96PY6 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.75■■□□□ 1.07
NEK1Q96PY6 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.75■■□□□ 1.07
NEK1Q96PY6 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.75■■□□□ 1.07
NEK1Q96PY6 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NEK1Q96PY6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NEK1Q96PY6 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.75■■□□□ 1.07
NEK1Q96PY6 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NEK1Q96PY6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
NEK1Q96PY6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC21.75■■□□□ 1.07
NEK1Q96PY6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
NEK1Q96PY6 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.75■■□□□ 1.07
NEK1Q96PY6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.75■■□□□ 1.07
NEK1Q96PY6 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
NEK1Q96PY6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NEK1Q96PY6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
NEK1Q96PY6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NEK1Q96PY6 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NEK1Q96PY6 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
NEK1Q96PY6 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NEK1Q96PY6 AP000523.1-201ENST00000398242 1049 ntBASIC21.74■■□□□ 1.07
NEK1Q96PY6 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
NEK1Q96PY6 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
NEK1Q96PY6 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NEK1Q96PY6 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
NEK1Q96PY6 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.74■■□□□ 1.07
NEK1Q96PY6 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.74■■□□□ 1.07
NEK1Q96PY6 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
NEK1Q96PY6 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
NEK1Q96PY6 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.74■■□□□ 1.07
NEK1Q96PY6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NEK1Q96PY6 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
NEK1Q96PY6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NEK1Q96PY6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NEK1Q96PY6 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NEK1Q96PY6 PHGDH-209ENST00000641074 1780 ntBASIC21.74■■□□□ 1.07
NEK1Q96PY6 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
NEK1Q96PY6 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
NEK1Q96PY6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NEK1Q96PY6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
NEK1Q96PY6 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
NEK1Q96PY6 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NEK1Q96PY6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NEK1Q96PY6 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
NEK1Q96PY6 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NEK1Q96PY6 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
NEK1Q96PY6 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.73■■□□□ 1.07
NEK1Q96PY6 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.73■■□□□ 1.07
NEK1Q96PY6 LIN28AP1-201ENST00000429574 405 ntBASIC21.73■■□□□ 1.07
NEK1Q96PY6 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.73■■□□□ 1.07
NEK1Q96PY6 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.73■■□□□ 1.07
NEK1Q96PY6 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NEK1Q96PY6 MIR3917-201ENST00000580971 93 ntBASIC21.73■■□□□ 1.07
NEK1Q96PY6 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.73■■□□□ 1.07
NEK1Q96PY6 AC005363.2-201ENST00000618631 242 ntBASIC21.73■■□□□ 1.07
NEK1Q96PY6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
NEK1Q96PY6 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NEK1Q96PY6 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NEK1Q96PY6 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NEK1Q96PY6 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NEK1Q96PY6 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.73■■□□□ 1.07
NEK1Q96PY6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NEK1Q96PY6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NEK1Q96PY6 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NEK1Q96PY6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.73■■□□□ 1.07
NEK1Q96PY6 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC21.73■■□□□ 1.07
NEK1Q96PY6 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NEK1Q96PY6 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
NEK1Q96PY6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NEK1Q96PY6 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NEK1Q96PY6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NEK1Q96PY6 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms