Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.96■□□□□ 0.47
PDLIM5Q96HC4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM5Q96HC4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PDLIM5Q96HC4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM5Q96HC4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM5Q96HC4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.96■□□□□ 0.47
PDLIM5Q96HC4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PDLIM5Q96HC4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.96■□□□□ 0.47
PDLIM5Q96HC4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.96■□□□□ 0.47
PDLIM5Q96HC4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.96■□□□□ 0.46
PDLIM5Q96HC4 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
PDLIM5Q96HC4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDLIM5Q96HC4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDLIM5Q96HC4 AC093010.1-201ENST00000473625 1624 ntBASIC17.95■□□□□ 0.46
PDLIM5Q96HC4 AL024508.2-201ENST00000607749 1894 ntBASIC17.95■□□□□ 0.46
PDLIM5Q96HC4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.95■□□□□ 0.46
PDLIM5Q96HC4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDLIM5Q96HC4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDLIM5Q96HC4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDLIM5Q96HC4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDLIM5Q96HC4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDLIM5Q96HC4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDLIM5Q96HC4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDLIM5Q96HC4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.95■□□□□ 0.46
PDLIM5Q96HC4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.95■□□□□ 0.46
PDLIM5Q96HC4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.95■□□□□ 0.46
PDLIM5Q96HC4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.95■□□□□ 0.46
PDLIM5Q96HC4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.95■□□□□ 0.46
PDLIM5Q96HC4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.95■□□□□ 0.46
PDLIM5Q96HC4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.95■□□□□ 0.46
PDLIM5Q96HC4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.95■□□□□ 0.46
PDLIM5Q96HC4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.95■□□□□ 0.46
PDLIM5Q96HC4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.95■□□□□ 0.46
PDLIM5Q96HC4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.95■□□□□ 0.46
PDLIM5Q96HC4 AC024243.1-201ENST00000609234 778 ntBASIC17.95■□□□□ 0.46
PDLIM5Q96HC4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PDLIM5Q96HC4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDLIM5Q96HC4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.95■□□□□ 0.46
PDLIM5Q96HC4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PDLIM5Q96HC4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDLIM5Q96HC4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.95■□□□□ 0.46
PDLIM5Q96HC4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.95■□□□□ 0.46
PDLIM5Q96HC4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PDLIM5Q96HC4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDLIM5Q96HC4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDLIM5Q96HC4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDLIM5Q96HC4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDLIM5Q96HC4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDLIM5Q96HC4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDLIM5Q96HC4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDLIM5Q96HC4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.94■□□□□ 0.46
PDLIM5Q96HC4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDLIM5Q96HC4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PDLIM5Q96HC4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.94■□□□□ 0.46
PDLIM5Q96HC4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDLIM5Q96HC4 AC087499.1-201ENST00000418141 1075 ntBASIC17.94■□□□□ 0.46
PDLIM5Q96HC4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.94■□□□□ 0.46
PDLIM5Q96HC4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDLIM5Q96HC4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.94■□□□□ 0.46
PDLIM5Q96HC4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.94■□□□□ 0.46
PDLIM5Q96HC4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.94■□□□□ 0.46
PDLIM5Q96HC4 MIR3917-201ENST00000580971 93 ntBASIC17.94■□□□□ 0.46
PDLIM5Q96HC4 AL138966.2-201ENST00000621997 464 ntBASIC17.94■□□□□ 0.46
PDLIM5Q96HC4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.94■□□□□ 0.46
PDLIM5Q96HC4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDLIM5Q96HC4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.94■□□□□ 0.46
PDLIM5Q96HC4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDLIM5Q96HC4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDLIM5Q96HC4 AC005332.8-201ENST00000622750 2735 ntBASIC17.94■□□□□ 0.46
PDLIM5Q96HC4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDLIM5Q96HC4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDLIM5Q96HC4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDLIM5Q96HC4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PDLIM5Q96HC4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PDLIM5Q96HC4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDLIM5Q96HC4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDLIM5Q96HC4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.94■□□□□ 0.46
PDLIM5Q96HC4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDLIM5Q96HC4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDLIM5Q96HC4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDLIM5Q96HC4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDLIM5Q96HC4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDLIM5Q96HC4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDLIM5Q96HC4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDLIM5Q96HC4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDLIM5Q96HC4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.93■□□□□ 0.46
PDLIM5Q96HC4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.93■□□□□ 0.46
PDLIM5Q96HC4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.93■□□□□ 0.46
PDLIM5Q96HC4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDLIM5Q96HC4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.93■□□□□ 0.46
PDLIM5Q96HC4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PDLIM5Q96HC4 AC092865.7-201ENST00000641832 219 ntBASIC17.93■□□□□ 0.46
PDLIM5Q96HC4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PDLIM5Q96HC4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.93■□□□□ 0.46
PDLIM5Q96HC4 AC068880.1-201ENST00000507289 2297 ntBASIC17.93■□□□□ 0.46
PDLIM5Q96HC4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.93■□□□□ 0.46
PDLIM5Q96HC4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.93■□□□□ 0.46
PDLIM5Q96HC4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.93■□□□□ 0.46
PDLIM5Q96HC4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDLIM5Q96HC4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms