Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IFT43Q96FT9 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IFT43Q96FT9 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.94■□□□□ 0.62
IFT43Q96FT9 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.94■□□□□ 0.62
IFT43Q96FT9 AL109659.2-201ENST00000606809 1674 ntBASIC18.94■□□□□ 0.62
IFT43Q96FT9 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
IFT43Q96FT9 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IFT43Q96FT9 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
IFT43Q96FT9 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.94■□□□□ 0.62
IFT43Q96FT9 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IFT43Q96FT9 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.94■□□□□ 0.62
IFT43Q96FT9 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IFT43Q96FT9 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
IFT43Q96FT9 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.93■□□□□ 0.62
IFT43Q96FT9 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IFT43Q96FT9 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
IFT43Q96FT9 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
IFT43Q96FT9 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
IFT43Q96FT9 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
IFT43Q96FT9 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
IFT43Q96FT9 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IFT43Q96FT9 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
IFT43Q96FT9 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.93■□□□□ 0.62
IFT43Q96FT9 COX11P1-201ENST00000489116 835 ntBASIC18.93■□□□□ 0.62
IFT43Q96FT9 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.93■□□□□ 0.62
IFT43Q96FT9 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.93■□□□□ 0.62
IFT43Q96FT9 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
IFT43Q96FT9 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
IFT43Q96FT9 MTMR9LP-203ENST00000426597 1545 ntBASIC18.93■□□□□ 0.62
IFT43Q96FT9 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.93■□□□□ 0.62
IFT43Q96FT9 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IFT43Q96FT9 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
IFT43Q96FT9 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
IFT43Q96FT9 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
IFT43Q96FT9 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.93■□□□□ 0.62
IFT43Q96FT9 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.93■□□□□ 0.62
IFT43Q96FT9 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IFT43Q96FT9 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
IFT43Q96FT9 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
IFT43Q96FT9 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IFT43Q96FT9 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
IFT43Q96FT9 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
IFT43Q96FT9 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
IFT43Q96FT9 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IFT43Q96FT9 AC008556.1-201ENST00000610908 2040 ntBASIC18.92■□□□□ 0.62
IFT43Q96FT9 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IFT43Q96FT9 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
IFT43Q96FT9 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.92■□□□□ 0.62
IFT43Q96FT9 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
IFT43Q96FT9 AC141257.4-201ENST00000634557 245 ntBASIC18.92■□□□□ 0.62
IFT43Q96FT9 AC136944.6-201ENST00000634818 245 ntBASIC18.92■□□□□ 0.62
IFT43Q96FT9 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.92■□□□□ 0.62
IFT43Q96FT9 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
IFT43Q96FT9 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IFT43Q96FT9 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IFT43Q96FT9 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IFT43Q96FT9 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IFT43Q96FT9 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
IFT43Q96FT9 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.92■□□□□ 0.62
IFT43Q96FT9 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.92■□□□□ 0.62
IFT43Q96FT9 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IFT43Q96FT9 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
IFT43Q96FT9 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.92■□□□□ 0.62
IFT43Q96FT9 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
IFT43Q96FT9 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IFT43Q96FT9 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
IFT43Q96FT9 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.91■□□□□ 0.62
IFT43Q96FT9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.91■□□□□ 0.62
IFT43Q96FT9 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IFT43Q96FT9 AL357033.4-201ENST00000617703 1807 ntBASIC18.91■□□□□ 0.62
IFT43Q96FT9 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
IFT43Q96FT9 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IFT43Q96FT9 AC018470.1-201ENST00000624790 3129 ntBASIC18.91■□□□□ 0.62
IFT43Q96FT9 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
IFT43Q96FT9 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.91■□□□□ 0.62
IFT43Q96FT9 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.91■□□□□ 0.62
IFT43Q96FT9 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
IFT43Q96FT9 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.91■□□□□ 0.62
IFT43Q96FT9 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.91■□□□□ 0.62
IFT43Q96FT9 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
IFT43Q96FT9 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.91■□□□□ 0.62
IFT43Q96FT9 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IFT43Q96FT9 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.91■□□□□ 0.62
IFT43Q96FT9 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IFT43Q96FT9 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
IFT43Q96FT9 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
IFT43Q96FT9 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
IFT43Q96FT9 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
IFT43Q96FT9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.91■□□□□ 0.62
IFT43Q96FT9 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.91■□□□□ 0.62
IFT43Q96FT9 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.91■□□□□ 0.62
IFT43Q96FT9 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.9■□□□□ 0.62
IFT43Q96FT9 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IFT43Q96FT9 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.9■□□□□ 0.62
IFT43Q96FT9 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IFT43Q96FT9 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IFT43Q96FT9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IFT43Q96FT9 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.9■□□□□ 0.62
IFT43Q96FT9 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IFT43Q96FT9 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms