Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC71Q8IV32 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC71Q8IV32 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC71Q8IV32 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC71Q8IV32 AC012313.1-201ENST00000593393 3059 ntBASIC17.25■□□□□ 0.35
CCDC71Q8IV32 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
CCDC71Q8IV32 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CCDC71Q8IV32 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC71Q8IV32 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC71Q8IV32 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC71Q8IV32 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC71Q8IV32 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC71Q8IV32 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC71Q8IV32 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC71Q8IV32 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC71Q8IV32 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC71Q8IV32 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC71Q8IV32 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC71Q8IV32 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC71Q8IV32 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC71Q8IV32 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC71Q8IV32 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC71Q8IV32 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC71Q8IV32 AK4P3-201ENST00000418260 669 ntBASIC17.24■□□□□ 0.35
CCDC71Q8IV32 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC71Q8IV32 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC71Q8IV32 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC71Q8IV32 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
CCDC71Q8IV32 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC71Q8IV32 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC71Q8IV32 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC71Q8IV32 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC71Q8IV32 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CCDC71Q8IV32 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC71Q8IV32 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC71Q8IV32 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC71Q8IV32 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
CCDC71Q8IV32 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC71Q8IV32 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC71Q8IV32 AL499627.1-201ENST00000569373 2188 ntBASIC17.23■□□□□ 0.35
CCDC71Q8IV32 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC71Q8IV32 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC71Q8IV32 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC71Q8IV32 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC71Q8IV32 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
CCDC71Q8IV32 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC71Q8IV32 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC71Q8IV32 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC71Q8IV32 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC71Q8IV32 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC71Q8IV32 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC71Q8IV32 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC71Q8IV32 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.23■□□□□ 0.35
CCDC71Q8IV32 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC71Q8IV32 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CCDC71Q8IV32 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.23■□□□□ 0.35
CCDC71Q8IV32 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC71Q8IV32 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC71Q8IV32 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC71Q8IV32 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC71Q8IV32 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC71Q8IV32 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC71Q8IV32 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC71Q8IV32 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CCDC71Q8IV32 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC71Q8IV32 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC71Q8IV32 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC71Q8IV32 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.22■□□□□ 0.35
CCDC71Q8IV32 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC71Q8IV32 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC71Q8IV32 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC71Q8IV32 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC71Q8IV32 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC71Q8IV32 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CCDC71Q8IV32 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC71Q8IV32 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CCDC71Q8IV32 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC71Q8IV32 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC71Q8IV32 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC71Q8IV32 BX664615.1-201ENST00000443558 458 ntBASIC17.22■□□□□ 0.35
CCDC71Q8IV32 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.22■□□□□ 0.35
CCDC71Q8IV32 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC71Q8IV32 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC71Q8IV32 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CCDC71Q8IV32 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC71Q8IV32 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.22■□□□□ 0.35
CCDC71Q8IV32 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CCDC71Q8IV32 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC71Q8IV32 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC71Q8IV32 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC71Q8IV32 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC71Q8IV32 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC71Q8IV32 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CCDC71Q8IV32 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC71Q8IV32 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CCDC71Q8IV32 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CCDC71Q8IV32 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC71Q8IV32 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC71Q8IV32 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC71Q8IV32 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms