Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.6□□□□□ -0.231e-9■■□□□ 11.8
LARP4Q71RC2 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC12.99□□□□□ -0.335e-7■■□□□ 11.8
LARP4Q71RC2 HNRNPL-207ENST00000598985 900 ntTSL 512.98□□□□□ -0.335e-7■■□□□ 11.8
LARP4Q71RC2 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.345e-7■■□□□ 11.8
LARP4Q71RC2 DDX5-207ENST00000578400 575 ntTSL 512.93□□□□□ -0.341e-9■■□□□ 11.8
LARP4Q71RC2 CCNL1-216ENST00000475298 2362 ntTSL 1 (best)12.77□□□□□ -0.377e-15■■□□□ 11.8
LARP4Q71RC2 AGAP3-214ENST00000476375 1019 ntTSL 512.62□□□□□ -0.395e-7■■□□□ 11.8
LARP4Q71RC2 KMT5A-204ENST00000437519 1774 ntTSL 212.56□□□□□ -0.45e-7■■□□□ 11.8
LARP4Q71RC2 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.45e-7■■□□□ 11.8
LARP4Q71RC2 MKI67-204ENST00000478293 654 ntTSL 512.23□□□□□ -0.451e-9■■□□□ 11.8
LARP4Q71RC2 RPS3A-209ENST00000510993 762 ntTSL 511.53□□□□□ -0.562e-10■■□□□ 11.8
LARP4Q71RC2 DDX5-218ENST00000581693 2156 ntTSL 511.49□□□□□ -0.571e-9■■□□□ 11.8
LARP4Q71RC2 CCDC14-211ENST00000463996 374 ntTSL 211.47□□□□□ -0.575e-7■■□□□ 11.8
LARP4Q71RC2 DDX5-203ENST00000540698 2225 ntTSL 511.33□□□□□ -0.61e-9■■□□□ 11.8
LARP4Q71RC2 DDX5-202ENST00000450599 2077 ntTSL 2 BASIC10.93□□□□□ -0.661e-9■■□□□ 11.8
LARP4Q71RC2 CCDC14-207ENST00000433542 3260 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.685e-7■■□□□ 11.8
LARP4Q71RC2 GCC2-201ENST00000309863 7537 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.692e-11■■□□□ 11.8
LARP4Q71RC2 CCDC14-201ENST00000310351 3111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.725e-7■■□□□ 11.8
LARP4Q71RC2 DDX5-233ENST00000585223 699 ntTSL 210.4□□□□□ -0.741e-9■■□□□ 11.8
LARP4Q71RC2 EMC3-AS1-201ENST00000326237 2882 ntTSL 210.37□□□□□ -0.755e-7■■□□□ 11.8
LARP4Q71RC2 CCDC14-222ENST00000495381 3993 ntTSL 29.58□□□□□ -0.885e-7■■□□□ 11.8
LARP4Q71RC2 CCDC14-203ENST00000409697 2962 ntAPPRIS ALT2 TSL 2 BASIC8.7□□□□□ -1.025e-7■■□□□ 11.8
LARP4Q71RC2 DDX5-231ENST00000585060 572 ntTSL 48.66□□□□□ -1.021e-9■■□□□ 11.8
LARP4Q71RC2 CKAP2-204ENST00000459902 798 ntTSL 28.52□□□□□ -1.055e-7■■□□□ 11.8
LARP4Q71RC2 DDX5-215ENST00000581230 3558 ntTSL 28.18□□□□□ -1.11e-9■■□□□ 11.8
LARP4Q71RC2 RPS3A-206ENST00000507485 1526 ntTSL 1 (best)8.11□□□□□ -1.112e-10■■□□□ 11.8
LARP4Q71RC2 CCNL1-218ENST00000476744 1029 ntTSL 27.61□□□□□ -1.197e-15■■□□□ 11.8
LARP4Q71RC2 CCDC14-205ENST00000419247 1221 ntAPPRIS ALT2 TSL 37.41□□□□□ -1.225e-7■■□□□ 11.8
LARP4Q71RC2 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.232e-10■■□□□ 11.8
LARP4Q71RC2 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC7.16□□□□□ -1.262e-10■■□□□ 11.8
LARP4Q71RC2 RPS3A-214ENST00000515818 572 ntTSL 57.16□□□□□ -1.262e-10■■□□□ 11.8
LARP4Q71RC2 CCDC14-216ENST00000483247 697 ntTSL 36.93□□□□□ -1.35e-7■■□□□ 11.8
LARP4Q71RC2 RPS3A-211ENST00000512797 686 ntTSL 26.6□□□□□ -1.352e-10■■□□□ 11.8
LARP4Q71RC2 PCM1-219ENST00000523540 640 ntTSL 26.33□□□□□ -1.41e-9■■□□□ 11.8
LARP4Q71RC2 CCNL1-211ENST00000468977 793 ntTSL 56.23□□□□□ -1.417e-15■■□□□ 11.8
LARP4Q71RC2 CCDC14-215ENST00000479903 770 ntAPPRIS ALT2 TSL 55.69□□□□□ -1.55e-7■■□□□ 11.8
LARP4Q71RC2 CCDC14-219ENST00000487498 615 ntTSL 35.18□□□□□ -1.585e-7■■□□□ 11.8
LARP4Q71RC2 AKAP9-204ENST00000394534 5652 ntAPPRIS ALT2 TSL 1 (best)5.17□□□□□ -1.585e-7■■□□□ 11.8
LARP4Q71RC2 GCC2-211ENST00000482325 6772 ntTSL 1 (best)5.06□□□□□ -1.62e-11■■□□□ 11.8
LARP4Q71RC2 CCDC14-202ENST00000409657 3815 ntTSL 25.04□□□□□ -1.65e-7■■□□□ 11.8
LARP4Q71RC2 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.99□□□□□ -1.612e-10■■□□□ 11.8
LARP4Q71RC2 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.67□□□□□ -1.662e-10■■□□□ 11.8
LARP4Q71RC2 RPS3A-213ENST00000515792 671 ntTSL 34.67□□□□□ -1.662e-10■■□□□ 11.8
LARP4Q71RC2 CCNL1-215ENST00000474539 4799 ntTSL 1 (best)4.42□□□□□ -1.77e-15■■□□□ 11.8
LARP4Q71RC2 RPS3A-205ENST00000507327 674 ntTSL 24.18□□□□□ -1.742e-10■■□□□ 11.8
LARP4Q71RC2 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.765e-7■■□□□ 11.8
LARP4Q71RC2 CCNL1-204ENST00000464316 3843 ntTSL 1 (best)3.85□□□□□ -1.797e-15■■□□□ 11.8
LARP4Q71RC2 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.97e-15■■□□□ 11.8
LARP4Q71RC2 CCNL1-214ENST00000471247 3671 ntTSL 1 (best)2.66□□□□□ -1.987e-15■■□□□ 11.8
LARP4Q71RC2 JMJD1C-203ENST00000402544 8011 ntTSL 1 (best)2.33□□□□□ -2.047e-15■■□□□ 11.8
LARP4Q71RC2 JMJD1C-201ENST00000327520 3781 ntTSL 22.04□□□□□ -2.087e-15■■□□□ 11.8
LARP4Q71RC2 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.227e-15■■□□□ 11.8
LARP4Q71RC2 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.285e-7■■□□□ 11.8
LARP4Q71RC2 GCC2-204ENST00000409896 2908 ntTSL 50.74□□□□□ -2.292e-11■■□□□ 11.8
LARP4Q71RC2 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.425e-23■■□□□ 11.8
LARP4Q71RC2 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.49■□□□□ 0.235e-23■■□□□ 11.8
LARP4Q71RC2 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.15■□□□□ 0.025e-23■■□□□ 11.8
LARP4Q71RC2 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC13.16□□□□□ -0.35e-23■■□□□ 11.8
LARP4Q71RC2 ANXA6-213ENST00000522664 451 ntTSL 58.44□□□□□ -1.065e-23■■□□□ 11.8
LARP4Q71RC2 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.38■□□□□ 0.213e-8■■□□□ 11.8
LARP4Q71RC2 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -03e-8■■□□□ 11.8
LARP4Q71RC2 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.69□□□□□ -0.063e-8■■□□□ 11.8
LARP4Q71RC2 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.67□□□□□ -0.063e-8■■□□□ 11.8
LARP4Q71RC2 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.75□□□□□ -0.213e-8■■□□□ 11.8
LARP4Q71RC2 LMNA-221ENST00000506981 576 ntTSL 217.76■□□□□ 0.438e-10■■□□□ 11.8
LARP4Q71RC2 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.46■□□□□ 0.397e-8■■□□□ 11.8
LARP4Q71RC2 LMNA-216ENST00000496738 2405 ntTSL 216.33■□□□□ 0.28e-10■■□□□ 11.8
LARP4Q71RC2 LMNA-217ENST00000498722 1348 ntTSL 215.42■□□□□ 0.068e-10■■□□□ 11.8
LARP4Q71RC2 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.28■□□□□ 0.048e-10■■□□□ 11.8
LARP4Q71RC2 LMNA-222ENST00000508500 848 ntTSL 1 (best)14.72□□□□□ -0.058e-10■■□□□ 11.8
LARP4Q71RC2 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.22□□□□□ -0.138e-10■■□□□ 11.8
LARP4Q71RC2 ENTPD6-214ENST00000463734 639 ntTSL 211.9□□□□□ -0.55e-19■■□□□ 11.8
LARP4Q71RC2 COLGALT1-202ENST00000593832 2941 ntTSL 214.22□□□□□ -0.131e-6■■□□□ 11.8
LARP4Q71RC2 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.451e-6■■□□□ 11.8
LARP4Q71RC2 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.12■■□□□ 1.294e-10■■□□□ 11.8
LARP4Q71RC2 RPS20-208ENST00000521262 650 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.484e-10■■□□□ 11.8
LARP4Q71RC2 RPS20-212ENST00000618656 627 ntTSL 3 BASIC8.68□□□□□ -1.024e-10■■□□□ 11.8
LARP4Q71RC2 RPS20-207ENST00000520627 423 ntTSL 5 BASIC8.53□□□□□ -1.044e-10■■□□□ 11.8
LARP4Q71RC2 RPS20-201ENST00000009589 626 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.164e-10■■□□□ 11.8
LARP4Q71RC2 RPS20-204ENST00000519606 424 ntTSL 3 BASIC7.78□□□□□ -1.164e-10■■□□□ 11.8
LARP4Q71RC2 RPS20-206ENST00000520490 402 ntTSL 37.54□□□□□ -1.22e-12■■□□□ 11.8
LARP4Q71RC2 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC7.17□□□□□ -1.264e-10■■□□□ 11.8
LARP4Q71RC2 SNRPF-203ENST00000551316 787 ntTSL 211.71□□□□□ -0.532e-7■■□□□ 11.8
LARP4Q71RC2 ERP44-201ENST00000262455 4854 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.425e-7■■□□□ 11.8
LARP4Q71RC2 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.047e-29■■□□□ 11.8
LARP4Q71RC2 VAT1-209ENST00000592388 478 ntTSL 56.64□□□□□ -1.357e-29■■□□□ 11.8
LARP4Q71RC2 ANPEP-201ENST00000300060 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.664e-8■■□□□ 11.8
LARP4Q71RC2 A2M-211ENST00000543436 600 ntTSL 510.38□□□□□ -0.751e-28■■□□□ 11.8
LARP4Q71RC2 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.251e-28■■□□□ 11.8
LARP4Q71RC2 CNBP-206ENST00000502372 1026 ntTSL 58.94□□□□□ -0.982e-15■■□□□ 11.8
LARP4Q71RC2 C2-212ENST00000482060 2335 ntTSL 212.66□□□□□ -0.383e-15■■□□□ 11.8
LARP4Q71RC2 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.463e-12■■□□□ 11.8
LARP4Q71RC2 PRDX1-202ENST00000319248 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.363e-12■■□□□ 11.8
LARP4Q71RC2 PRDX1-203ENST00000372079 609 ntTSL 3 BASIC10.71□□□□□ -0.693e-12■■□□□ 11.8
LARP4Q71RC2 RPS17-204ENST00000559776 760 ntTSL 213.19□□□□□ -0.32e-21■■□□□ 11.8
LARP4Q71RC2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.583e-6■■□□□ 11.8
LARP4Q71RC2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.523e-6■■□□□ 11.8
LARP4Q71RC2 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.48■□□□□ 0.873e-6■■□□□ 11.8
LARP4Q71RC2 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -05e-6■■□□□ 11.8
LARP4Q71RC2 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.463e-6■■□□□ 11.8
Retrieved 100 of 15,922 protein–RNA pairs in 195.9 ms