Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CAPN1P07384 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN1P07384 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN1P07384 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN1P07384 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN1P07384 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN1P07384 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
CAPN1P07384 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN1P07384 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
CAPN1P07384 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN1P07384 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.12■□□□□ 0.49
CAPN1P07384 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN1P07384 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN1P07384 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN1P07384 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN1P07384 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN1P07384 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN1P07384 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN1P07384 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN1P07384 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CAPN1P07384 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.11■□□□□ 0.49
CAPN1P07384 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN1P07384 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN1P07384 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN1P07384 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN1P07384 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN1P07384 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
CAPN1P07384 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.11■□□□□ 0.49
CAPN1P07384 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CAPN1P07384 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CAPN1P07384 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.11■□□□□ 0.49
CAPN1P07384 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN1P07384 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN1P07384 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN1P07384 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN1P07384 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN1P07384 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
CAPN1P07384 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CAPN1P07384 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.1■□□□□ 0.49
CAPN1P07384 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN1P07384 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CAPN1P07384 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN1P07384 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN1P07384 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN1P07384 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN1P07384 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CAPN1P07384 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN1P07384 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CAPN1P07384 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.1■□□□□ 0.49
CAPN1P07384 RCC2P3-201ENST00000418112 1537 ntBASIC18.1■□□□□ 0.49
CAPN1P07384 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN1P07384 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN1P07384 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN1P07384 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.1■□□□□ 0.49
CAPN1P07384 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN1P07384 BX664615.1-201ENST00000443558 458 ntBASIC18.1■□□□□ 0.49
CAPN1P07384 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.1■□□□□ 0.49
CAPN1P07384 WWOX-216ENST00000569818 525 ntBASIC18.1■□□□□ 0.49
CAPN1P07384 NTF6B-201ENST00000591913 560 ntBASIC18.1■□□□□ 0.49
CAPN1P07384 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN1P07384 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN1P07384 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN1P07384 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN1P07384 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN1P07384 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN1P07384 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CAPN1P07384 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN1P07384 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.09■□□□□ 0.49
CAPN1P07384 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN1P07384 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CAPN1P07384 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN1P07384 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.09■□□□□ 0.49
CAPN1P07384 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN1P07384 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN1P07384 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN1P07384 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.09■□□□□ 0.49
CAPN1P07384 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN1P07384 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN1P07384 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN1P07384 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN1P07384 TSPY17P-201ENST00000450329 467 ntBASIC18.09■□□□□ 0.49
CAPN1P07384 CA15P1-201ENST00000481698 905 ntBASIC18.09■□□□□ 0.49
CAPN1P07384 AL353719.1-201ENST00000566847 864 ntBASIC18.09■□□□□ 0.49
CAPN1P07384 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN1P07384 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN1P07384 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN1P07384 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CAPN1P07384 ABALON-201ENST00000629058 1903 ntBASIC18.09■□□□□ 0.49
CAPN1P07384 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN1P07384 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN1P07384 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.08■□□□□ 0.49
CAPN1P07384 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CAPN1P07384 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CAPN1P07384 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.08■□□□□ 0.49
CAPN1P07384 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CAPN1P07384 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CAPN1P07384 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
CAPN1P07384 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.08■□□□□ 0.48
CAPN1P07384 AC117947.1-201ENST00000427448 529 ntBASIC18.08■□□□□ 0.48
CAPN1P07384 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms