Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
NDUFS4O43181 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
NDUFS4O43181 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFS4O43181 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.62■□□□□ 0.41
NDUFS4O43181 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFS4O43181 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.62■□□□□ 0.41
NDUFS4O43181 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.62■□□□□ 0.41
NDUFS4O43181 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFS4O43181 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFS4O43181 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFS4O43181 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NDUFS4O43181 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFS4O43181 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFS4O43181 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.62■□□□□ 0.41
NDUFS4O43181 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFS4O43181 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFS4O43181 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NDUFS4O43181 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFS4O43181 RNF152P1-201ENST00000397754 604 ntBASIC17.62■□□□□ 0.41
NDUFS4O43181 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
NDUFS4O43181 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.62■□□□□ 0.41
NDUFS4O43181 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFS4O43181 AC034232.1-201ENST00000506026 1064 ntBASIC17.62■□□□□ 0.41
NDUFS4O43181 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
NDUFS4O43181 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFS4O43181 AC009065.1-201ENST00000564055 1225 ntBASIC17.62■□□□□ 0.41
NDUFS4O43181 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.62■□□□□ 0.41
NDUFS4O43181 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.62■□□□□ 0.41
NDUFS4O43181 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.62■□□□□ 0.41
NDUFS4O43181 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
NDUFS4O43181 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFS4O43181 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.62■□□□□ 0.41
NDUFS4O43181 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.62■□□□□ 0.41
NDUFS4O43181 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
NDUFS4O43181 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.62■□□□□ 0.41
NDUFS4O43181 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFS4O43181 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NDUFS4O43181 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NDUFS4O43181 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.61■□□□□ 0.41
NDUFS4O43181 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.61■□□□□ 0.41
NDUFS4O43181 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.61■□□□□ 0.41
NDUFS4O43181 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDUFS4O43181 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDUFS4O43181 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDUFS4O43181 AC104076.2-201ENST00000448912 469 ntBASIC17.61■□□□□ 0.41
NDUFS4O43181 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.61■□□□□ 0.41
NDUFS4O43181 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.61■□□□□ 0.41
NDUFS4O43181 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NDUFS4O43181 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NDUFS4O43181 MIR3917-201ENST00000580971 93 ntBASIC17.61■□□□□ 0.41
NDUFS4O43181 MIR3180-4-201ENST00000582223 153 ntBASIC17.61■□□□□ 0.41
NDUFS4O43181 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.61■□□□□ 0.41
NDUFS4O43181 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
NDUFS4O43181 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NDUFS4O43181 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NDUFS4O43181 NEFHP1-201ENST00000412845 2629 ntBASIC17.61■□□□□ 0.41
NDUFS4O43181 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDUFS4O43181 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
NDUFS4O43181 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NDUFS4O43181 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.61■□□□□ 0.41
NDUFS4O43181 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
NDUFS4O43181 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NDUFS4O43181 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
NDUFS4O43181 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NDUFS4O43181 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDUFS4O43181 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDUFS4O43181 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDUFS4O43181 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDUFS4O43181 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NDUFS4O43181 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.6■□□□□ 0.41
NDUFS4O43181 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NDUFS4O43181 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NDUFS4O43181 TSPY5P-201ENST00000426936 936 ntBASIC17.6■□□□□ 0.41
NDUFS4O43181 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.6■□□□□ 0.41
NDUFS4O43181 AC092647.4-201ENST00000457211 535 ntBASIC17.6■□□□□ 0.41
NDUFS4O43181 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.6■□□□□ 0.41
NDUFS4O43181 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.6■□□□□ 0.41
NDUFS4O43181 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NDUFS4O43181 AC009102.3-201ENST00000623118 1491 ntBASIC17.6■□□□□ 0.41
NDUFS4O43181 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
NDUFS4O43181 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDUFS4O43181 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
NDUFS4O43181 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
NDUFS4O43181 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDUFS4O43181 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.6■□□□□ 0.41
NDUFS4O43181 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NDUFS4O43181 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.6■□□□□ 0.41
NDUFS4O43181 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDUFS4O43181 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NDUFS4O43181 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.59■□□□□ 0.41
NDUFS4O43181 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NDUFS4O43181 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NDUFS4O43181 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.59■□□□□ 0.41
NDUFS4O43181 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.59■□□□□ 0.41
NDUFS4O43181 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NDUFS4O43181 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.59■□□□□ 0.41
NDUFS4O43181 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NDUFS4O43181 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
NDUFS4O43181 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NDUFS4O43181 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms